PMC:7267243 / 11617-12112 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"350","span":{"begin":14,"end":19},"obj":"Species"},{"id":"351","span":{"begin":351,"end":358},"obj":"Species"},{"id":"352","span":{"begin":450,"end":457},"obj":"Species"},{"id":"353","span":{"begin":94,"end":104},"obj":"Species"},{"id":"354","span":{"begin":71,"end":73},"obj":"Chemical"},{"id":"355","span":{"begin":112,"end":125},"obj":"Chemical"},{"id":"356","span":{"begin":387,"end":398},"obj":"Chemical"},{"id":"357","span":{"begin":54,"end":58},"obj":"Disease"}],"attributes":[{"id":"A350","pred":"tao:has_database_id","subj":"350","obj":"Tax:9606"},{"id":"A351","pred":"tao:has_database_id","subj":"351","obj":"Tax:9606"},{"id":"A352","pred":"tao:has_database_id","subj":"352","obj":"Tax:9606"},{"id":"A353","pred":"tao:has_database_id","subj":"353","obj":"Tax:2697049"},{"id":"A355","pred":"tao:has_database_id","subj":"355","obj":"MESH:C012990"},{"id":"A356","pred":"tao:has_database_id","subj":"356","obj":"MESH:D000077336"},{"id":"A357","pred":"tao:has_database_id","subj":"357","obj":"MESH:D012128"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"A 54‐year‐old woman was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2. Serum galactomannan returned positive in two consecutive serum samples. Chest CT showed bilateral ground‐glass opacities, smaller areas with crazy paving pattern, central and peripheral consolidations, and smaller nodular infiltrates (Video S5, patient #5, Figure 1E). Intravenous caspofungin was started. No autopsies were performed. Detailed patient characteristics are given in Table 1."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T22","span":{"begin":106,"end":111},"obj":"Body_part"},{"id":"T23","span":{"begin":163,"end":168},"obj":"Body_part"},{"id":"T24","span":{"begin":178,"end":183},"obj":"Body_part"}],"attributes":[{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma63083"},{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma63083"},{"id":"A24","pred":"fma_id","subj":"T24","obj":"http://purl.org/sig/ont/fma/fma9576"}],"text":"A 54‐year‐old woman was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2. Serum galactomannan returned positive in two consecutive serum samples. Chest CT showed bilateral ground‐glass opacities, smaller areas with crazy paving pattern, central and peripheral consolidations, and smaller nodular infiltrates (Video S5, patient #5, Figure 1E). Intravenous caspofungin was started. No autopsies were performed. Detailed patient characteristics are given in Table 1."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T16","span":{"begin":106,"end":111},"obj":"Body_part"},{"id":"T17","span":{"begin":163,"end":168},"obj":"Body_part"},{"id":"T18","span":{"begin":178,"end":183},"obj":"Body_part"}],"attributes":[{"id":"A16","pred":"uberon_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"A17","pred":"uberon_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"A18","pred":"uberon_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"}],"text":"A 54‐year‐old woman was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2. Serum galactomannan returned positive in two consecutive serum samples. Chest CT showed bilateral ground‐glass opacities, smaller areas with crazy paving pattern, central and peripheral consolidations, and smaller nodular infiltrates (Video S5, patient #5, Figure 1E). Intravenous caspofungin was started. No autopsies were performed. Detailed patient characteristics are given in Table 1."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T118","span":{"begin":54,"end":58},"obj":"Disease"},{"id":"T119","span":{"begin":71,"end":73},"obj":"Disease"},{"id":"T120","span":{"begin":94,"end":98},"obj":"Disease"}],"attributes":[{"id":"A118","pred":"mondo_id","subj":"T118","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A119","pred":"mondo_id","subj":"T119","obj":"http://purl.obolibrary.org/obo/MONDO_0017991"},{"id":"A120","pred":"mondo_id","subj":"T120","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"A 54‐year‐old woman was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2. Serum galactomannan returned positive in two consecutive serum samples. Chest CT showed bilateral ground‐glass opacities, smaller areas with crazy paving pattern, central and peripheral consolidations, and smaller nodular infiltrates (Video S5, patient #5, Figure 1E). Intravenous caspofungin was started. No autopsies were performed. Detailed patient characteristics are given in Table 1."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T88","span":{"begin":0,"end":4},"obj":"http://purl.obolibrary.org/obo/CLO_0001599"},{"id":"T89","span":{"begin":74,"end":80},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T90","span":{"begin":178,"end":183},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T91","span":{"begin":347,"end":349},"obj":"http://purl.obolibrary.org/obo/CLO_0008933"}],"text":"A 54‐year‐old woman was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2. Serum galactomannan returned positive in two consecutive serum samples. Chest CT showed bilateral ground‐glass opacities, smaller areas with crazy paving pattern, central and peripheral consolidations, and smaller nodular infiltrates (Video S5, patient #5, Figure 1E). Intravenous caspofungin was started. No autopsies were performed. Detailed patient characteristics are given in Table 1."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T98","span":{"begin":71,"end":73},"obj":"Chemical"},{"id":"T99","span":{"begin":112,"end":125},"obj":"Chemical"},{"id":"T100","span":{"begin":347,"end":349},"obj":"Chemical"},{"id":"T101","span":{"begin":387,"end":398},"obj":"Chemical"}],"attributes":[{"id":"A98","pred":"chebi_id","subj":"T98","obj":"http://purl.obolibrary.org/obo/CHEBI_74824"},{"id":"A99","pred":"chebi_id","subj":"T99","obj":"http://purl.obolibrary.org/obo/CHEBI_27680"},{"id":"A100","pred":"chebi_id","subj":"T100","obj":"http://purl.obolibrary.org/obo/CHEBI_29386"},{"id":"A101","pred":"chebi_id","subj":"T101","obj":"http://purl.obolibrary.org/obo/CHEBI_474180"}],"text":"A 54‐year‐old woman was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2. Serum galactomannan returned positive in two consecutive serum samples. Chest CT showed bilateral ground‐glass opacities, smaller areas with crazy paving pattern, central and peripheral consolidations, and smaller nodular infiltrates (Video S5, patient #5, Figure 1E). Intravenous caspofungin was started. No autopsies were performed. Detailed patient characteristics are given in Table 1."}

{"project":"LitCovid-PD-GlycoEpitope","denotations":[{"id":"T7","span":{"begin":112,"end":125},"obj":"GlycoEpitope"}],"attributes":[{"id":"A7","pred":"glyco_epitope_db_id","subj":"T7","obj":"http://www.glycoepitope.jp/epitopes/EP0510"}],"text":"A 54‐year‐old woman was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2. Serum galactomannan returned positive in two consecutive serum samples. Chest CT showed bilateral ground‐glass opacities, smaller areas with crazy paving pattern, central and peripheral consolidations, and smaller nodular infiltrates (Video S5, patient #5, Figure 1E). Intravenous caspofungin was started. No autopsies were performed. Detailed patient characteristics are given in Table 1."}

{"project":"LitCovid-sentences","denotations":[{"id":"T137","span":{"begin":0,"end":105},"obj":"Sentence"},{"id":"T138","span":{"begin":106,"end":177},"obj":"Sentence"},{"id":"T139","span":{"begin":178,"end":374},"obj":"Sentence"},{"id":"T140","span":{"begin":375,"end":411},"obj":"Sentence"},{"id":"T141","span":{"begin":412,"end":440},"obj":"Sentence"},{"id":"T142","span":{"begin":441,"end":495},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"A 54‐year‐old woman was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2. Serum galactomannan returned positive in two consecutive serum samples. Chest CT showed bilateral ground‐glass opacities, smaller areas with crazy paving pattern, central and peripheral consolidations, and smaller nodular infiltrates (Video S5, patient #5, Figure 1E). Intravenous caspofungin was started. No autopsies were performed. Detailed patient characteristics are given in Table 1."}