PMC:7267243 / 11617-12112
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 350 | 14-19 | Species | denotes | woman | Tax:9606 |
| 351 | 351-358 | Species | denotes | patient | Tax:9606 |
| 352 | 450-457 | Species | denotes | patient | Tax:9606 |
| 353 | 94-104 | Species | denotes | SARS‐CoV‐2 | Tax:2697049 |
| 354 | 71-73 | Chemical | denotes | TA | |
| 355 | 112-125 | Chemical | denotes | galactomannan | MESH:C012990 |
| 356 | 387-398 | Chemical | denotes | caspofungin | MESH:D000077336 |
| 357 | 54-58 | Disease | denotes | ARDS | MESH:D012128 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T22 | 106-111 | Body_part | denotes | Serum | http://purl.org/sig/ont/fma/fma63083 |
| T23 | 163-168 | Body_part | denotes | serum | http://purl.org/sig/ont/fma/fma63083 |
| T24 | 178-183 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T16 | 106-111 | Body_part | denotes | Serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T17 | 163-168 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T18 | 178-183 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T118 | 54-58 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T119 | 71-73 | Disease | denotes | TA | http://purl.obolibrary.org/obo/MONDO_0017991 |
| T120 | 94-98 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T88 | 0-4 | http://purl.obolibrary.org/obo/CLO_0001599 | denotes | A 54 |
| T89 | 74-80 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T90 | 178-183 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T91 | 347-349 | http://purl.obolibrary.org/obo/CLO_0008933 | denotes | S5 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T98 | 71-73 | Chemical | denotes | TA | http://purl.obolibrary.org/obo/CHEBI_74824 |
| T99 | 112-125 | Chemical | denotes | galactomannan | http://purl.obolibrary.org/obo/CHEBI_27680 |
| T100 | 347-349 | Chemical | denotes | S5 | http://purl.obolibrary.org/obo/CHEBI_29386 |
| T101 | 387-398 | Chemical | denotes | caspofungin | http://purl.obolibrary.org/obo/CHEBI_474180 |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T7 | 112-125 | GlycoEpitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T137 | 0-105 | Sentence | denotes | A 54‐year‐old woman was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2. |
| T138 | 106-177 | Sentence | denotes | Serum galactomannan returned positive in two consecutive serum samples. |
| T139 | 178-374 | Sentence | denotes | Chest CT showed bilateral ground‐glass opacities, smaller areas with crazy paving pattern, central and peripheral consolidations, and smaller nodular infiltrates (Video S5, patient #5, Figure 1E). |
| T140 | 375-411 | Sentence | denotes | Intravenous caspofungin was started. |
| T141 | 412-440 | Sentence | denotes | No autopsies were performed. |
| T142 | 441-495 | Sentence | denotes | Detailed patient characteristics are given in Table 1. |