PMC:7267243 / 11277-11616 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"335","span":{"begin":92,"end":102},"obj":"Species"},{"id":"336","span":{"begin":108,"end":129},"obj":"Species"},{"id":"337","span":{"begin":280,"end":287},"obj":"Species"},{"id":"338","span":{"begin":69,"end":71},"obj":"Chemical"},{"id":"339","span":{"begin":316,"end":328},"obj":"Chemical"},{"id":"340","span":{"begin":52,"end":56},"obj":"Disease"},{"id":"341","span":{"begin":187,"end":196},"obj":"Disease"}],"attributes":[{"id":"A335","pred":"tao:has_database_id","subj":"335","obj":"Tax:2697049"},{"id":"A336","pred":"tao:has_database_id","subj":"336","obj":"Tax:746128"},{"id":"A337","pred":"tao:has_database_id","subj":"337","obj":"Tax:9606"},{"id":"A339","pred":"tao:has_database_id","subj":"339","obj":"MESH:D065819"},{"id":"A340","pred":"tao:has_database_id","subj":"340","obj":"MESH:D012128"},{"id":"A341","pred":"tao:has_database_id","subj":"341","obj":"MESH:D004646"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"A 73‐year‐old man was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2, and Aspergillus fumigatus that also grew in culture. Chest CT showed known bullous emphysema with ground‐glass opacities and consolidations with nodular infiltrates (Video S4, patient #4, Figure 1D). Intravenous voriconazole was begun."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T21","span":{"begin":157,"end":162},"obj":"Body_part"}],"attributes":[{"id":"A21","pred":"fma_id","subj":"T21","obj":"http://purl.org/sig/ont/fma/fma9576"}],"text":"A 73‐year‐old man was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2, and Aspergillus fumigatus that also grew in culture. Chest CT showed known bullous emphysema with ground‐glass opacities and consolidations with nodular infiltrates (Video S4, patient #4, Figure 1D). Intravenous voriconazole was begun."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T15","span":{"begin":157,"end":162},"obj":"Body_part"}],"attributes":[{"id":"A15","pred":"uberon_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"}],"text":"A 73‐year‐old man was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2, and Aspergillus fumigatus that also grew in culture. Chest CT showed known bullous emphysema with ground‐glass opacities and consolidations with nodular infiltrates (Video S4, patient #4, Figure 1D). Intravenous voriconazole was begun."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T114","span":{"begin":52,"end":56},"obj":"Disease"},{"id":"T115","span":{"begin":69,"end":71},"obj":"Disease"},{"id":"T116","span":{"begin":92,"end":96},"obj":"Disease"},{"id":"T117","span":{"begin":187,"end":196},"obj":"Disease"}],"attributes":[{"id":"A114","pred":"mondo_id","subj":"T114","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A115","pred":"mondo_id","subj":"T115","obj":"http://purl.obolibrary.org/obo/MONDO_0017991"},{"id":"A116","pred":"mondo_id","subj":"T116","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A117","pred":"mondo_id","subj":"T117","obj":"http://purl.obolibrary.org/obo/MONDO_0004849"}],"text":"A 73‐year‐old man was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2, and Aspergillus fumigatus that also grew in culture. Chest CT showed known bullous emphysema with ground‐glass opacities and consolidations with nodular infiltrates (Video S4, patient #4, Figure 1D). Intravenous voriconazole was begun."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T85","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T86","span":{"begin":72,"end":78},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T87","span":{"begin":157,"end":162},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"}],"text":"A 73‐year‐old man was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2, and Aspergillus fumigatus that also grew in culture. Chest CT showed known bullous emphysema with ground‐glass opacities and consolidations with nodular infiltrates (Video S4, patient #4, Figure 1D). Intravenous voriconazole was begun."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T95","span":{"begin":69,"end":71},"obj":"Chemical"},{"id":"T96","span":{"begin":276,"end":278},"obj":"Chemical"},{"id":"T97","span":{"begin":316,"end":328},"obj":"Chemical"}],"attributes":[{"id":"A95","pred":"chebi_id","subj":"T95","obj":"http://purl.obolibrary.org/obo/CHEBI_74824"},{"id":"A96","pred":"chebi_id","subj":"T96","obj":"http://purl.obolibrary.org/obo/CHEBI_29401"},{"id":"A97","pred":"chebi_id","subj":"T97","obj":"http://purl.obolibrary.org/obo/CHEBI_10023"}],"text":"A 73‐year‐old man was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2, and Aspergillus fumigatus that also grew in culture. Chest CT showed known bullous emphysema with ground‐glass opacities and consolidations with nodular infiltrates (Video S4, patient #4, Figure 1D). Intravenous voriconazole was begun."}

{"project":"LitCovid-sentences","denotations":[{"id":"T134","span":{"begin":0,"end":156},"obj":"Sentence"},{"id":"T135","span":{"begin":157,"end":303},"obj":"Sentence"},{"id":"T136","span":{"begin":304,"end":339},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"A 73‐year‐old man was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2, and Aspergillus fumigatus that also grew in culture. Chest CT showed known bullous emphysema with ground‐glass opacities and consolidations with nodular infiltrates (Video S4, patient #4, Figure 1D). Intravenous voriconazole was begun."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T46","span":{"begin":187,"end":196},"obj":"Phenotype"}],"attributes":[{"id":"A46","pred":"hp_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/HP_0002097"}],"text":"A 73‐year‐old man was transferred to the ICU due to ARDS with PCR on TA tested positive for SARS‐CoV‐2, and Aspergillus fumigatus that also grew in culture. Chest CT showed known bullous emphysema with ground‐glass opacities and consolidations with nodular infiltrates (Video S4, patient #4, Figure 1D). Intravenous voriconazole was begun."}