PMC:7267243 / 10881-11276 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"322","span":{"begin":86,"end":96},"obj":"Species"},{"id":"323","span":{"begin":114,"end":135},"obj":"Species"},{"id":"324","span":{"begin":323,"end":330},"obj":"Species"},{"id":"325","span":{"begin":170,"end":183},"obj":"Chemical"},{"id":"326","span":{"begin":358,"end":370},"obj":"Chemical"},{"id":"327","span":{"begin":33,"end":37},"obj":"Disease"}],"attributes":[{"id":"A322","pred":"tao:has_database_id","subj":"322","obj":"Tax:2697049"},{"id":"A323","pred":"tao:has_database_id","subj":"323","obj":"Tax:746128"},{"id":"A324","pred":"tao:has_database_id","subj":"324","obj":"Tax:9606"},{"id":"A325","pred":"tao:has_database_id","subj":"325","obj":"MESH:C012990"},{"id":"A326","pred":"tao:has_database_id","subj":"326","obj":"MESH:D065819"},{"id":"A327","pred":"tao:has_database_id","subj":"327","obj":"MESH:D012128"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. BALF was positive for galactomannan. Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). Intravenous voriconazole treatment was initiated."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T19","span":{"begin":185,"end":190},"obj":"Body_part"},{"id":"T20","span":{"begin":274,"end":282},"obj":"Body_part"}],"attributes":[{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma76576"}],"text":"A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. BALF was positive for galactomannan. Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). Intravenous voriconazole treatment was initiated."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T14","span":{"begin":185,"end":190},"obj":"Body_part"}],"attributes":[{"id":"A14","pred":"uberon_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"}],"text":"A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. BALF was positive for galactomannan. Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). Intravenous voriconazole treatment was initiated."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T111","span":{"begin":33,"end":37},"obj":"Disease"},{"id":"T112","span":{"begin":74,"end":76},"obj":"Disease"},{"id":"T113","span":{"begin":86,"end":90},"obj":"Disease"}],"attributes":[{"id":"A111","pred":"mondo_id","subj":"T111","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A112","pred":"mondo_id","subj":"T112","obj":"http://purl.obolibrary.org/obo/MONDO_0017991"},{"id":"A113","pred":"mondo_id","subj":"T113","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. BALF was positive for galactomannan. Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). Intravenous voriconazole treatment was initiated."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T81","span":{"begin":0,"end":4},"obj":"http://purl.obolibrary.org/obo/CLO_0001599"},{"id":"T82","span":{"begin":43,"end":44},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T83","span":{"begin":185,"end":190},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T84","span":{"begin":274,"end":282},"obj":"http://purl.obolibrary.org/obo/UBERON_0002553"}],"text":"A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. BALF was positive for galactomannan. Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). Intravenous voriconazole treatment was initiated."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T89","span":{"begin":70,"end":72},"obj":"Chemical"},{"id":"T91","span":{"begin":74,"end":76},"obj":"Chemical"},{"id":"T92","span":{"begin":170,"end":183},"obj":"Chemical"},{"id":"T93","span":{"begin":319,"end":321},"obj":"Chemical"},{"id":"T94","span":{"begin":358,"end":370},"obj":"Chemical"}],"attributes":[{"id":"A89","pred":"chebi_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/CHEBI_16170"},{"id":"A90","pred":"chebi_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/CHEBI_25195"},{"id":"A91","pred":"chebi_id","subj":"T91","obj":"http://purl.obolibrary.org/obo/CHEBI_74824"},{"id":"A92","pred":"chebi_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/CHEBI_27680"},{"id":"A93","pred":"chebi_id","subj":"T93","obj":"http://purl.obolibrary.org/obo/CHEBI_29388"},{"id":"A94","pred":"chebi_id","subj":"T94","obj":"http://purl.obolibrary.org/obo/CHEBI_10023"}],"text":"A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. BALF was positive for galactomannan. Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). Intravenous voriconazole treatment was initiated."}

{"project":"LitCovid-PD-GlycoEpitope","denotations":[{"id":"T6","span":{"begin":170,"end":183},"obj":"GlycoEpitope"}],"attributes":[{"id":"A6","pred":"glyco_epitope_db_id","subj":"T6","obj":"http://www.glycoepitope.jp/epitopes/EP0510"}],"text":"A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. BALF was positive for galactomannan. Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). Intravenous voriconazole treatment was initiated."}

{"project":"LitCovid-sentences","denotations":[{"id":"T129","span":{"begin":0,"end":73},"obj":"Sentence"},{"id":"T130","span":{"begin":74,"end":147},"obj":"Sentence"},{"id":"T131","span":{"begin":148,"end":184},"obj":"Sentence"},{"id":"T132","span":{"begin":185,"end":345},"obj":"Sentence"},{"id":"T133","span":{"begin":346,"end":395},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. BALF was positive for galactomannan. Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). Intravenous voriconazole treatment was initiated."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T45","span":{"begin":294,"end":311},"obj":"Phenotype"}],"attributes":[{"id":"A45","pred":"hp_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/HP_0032172"}],"text":"A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. BALF was positive for galactomannan. Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). Intravenous voriconazole treatment was initiated."}