PMC:7267243 / 10881-11276
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 322 | 86-96 | Species | denotes | SARS‐CoV‐2 | Tax:2697049 |
| 323 | 114-135 | Species | denotes | Aspergillus fumigatus | Tax:746128 |
| 324 | 323-330 | Species | denotes | patient | Tax:9606 |
| 325 | 170-183 | Chemical | denotes | galactomannan | MESH:C012990 |
| 326 | 358-370 | Chemical | denotes | voriconazole | MESH:D065819 |
| 327 | 33-37 | Disease | denotes | ARDS | MESH:D012128 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T19 | 185-190 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
| T20 | 274-282 | Body_part | denotes | cavities | http://purl.org/sig/ont/fma/fma76576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T14 | 185-190 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T111 | 33-37 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T112 | 74-76 | Disease | denotes | TA | http://purl.obolibrary.org/obo/MONDO_0017991 |
| T113 | 86-90 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T81 | 0-4 | http://purl.obolibrary.org/obo/CLO_0001599 | denotes | A 54 |
| T82 | 43-44 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T83 | 185-190 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T84 | 274-282 | http://purl.obolibrary.org/obo/UBERON_0002553 | denotes | cavities |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T89 | 70-72 | Chemical | denotes | Hg | http://purl.obolibrary.org/obo/CHEBI_16170|http://purl.obolibrary.org/obo/CHEBI_25195 |
| T91 | 74-76 | Chemical | denotes | TA | http://purl.obolibrary.org/obo/CHEBI_74824 |
| T92 | 170-183 | Chemical | denotes | galactomannan | http://purl.obolibrary.org/obo/CHEBI_27680 |
| T93 | 319-321 | Chemical | denotes | S3 | http://purl.obolibrary.org/obo/CHEBI_29388 |
| T94 | 358-370 | Chemical | denotes | voriconazole | http://purl.obolibrary.org/obo/CHEBI_10023 |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T6 | 170-183 | GlycoEpitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T129 | 0-73 | Sentence | denotes | A 54‐year‐old man presented with ARDS with a Horowitz‐Index of 128 mm Hg. |
| T130 | 74-147 | Sentence | denotes | TA revealed SARS‐CoV‐2 PCR positive and Aspergillus fumigatus in culture. |
| T131 | 148-184 | Sentence | denotes | BALF was positive for galactomannan. |
| T132 | 185-345 | Sentence | denotes | Chest CT showed bilateral ground‐glass opacities, diffuse nodular infiltrates and cystic cavities and partly air crescent sign (Video S3, patient #3 Figure 1C). |
| T133 | 346-395 | Sentence | denotes | Intravenous voriconazole treatment was initiated. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T45 | 294-311 | Phenotype | denotes | air crescent sign | http://purl.obolibrary.org/obo/HP_0032172 |