PMC:7267243 / 10325-10880
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
307 | 129-133 | Species | denotes | hMPV | Tax:162145 |
308 | 135-145 | Species | denotes | SARS‐CoV‐2 | Tax:2697049 |
309 | 150-171 | Species | denotes | Aspergillus fumigatus | Tax:746128 |
310 | 377-384 | Species | denotes | patient | Tax:9606 |
311 | 196-209 | Chemical | denotes | galactomannan | MESH:C012990 |
312 | 260-273 | Chemical | denotes | galactomannan | MESH:C012990 |
313 | 519-532 | Chemical | denotes | isavuconazole | MESH:C508735 |
314 | 53-57 | Disease | denotes | ARDS | MESH:D012128 |
315 | 407-426 | Disease | denotes | acute renal failure | MESH:D058186 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T16 | 190-195 | Body_part | denotes | serum | http://purl.org/sig/ont/fma/fma63083 |
T17 | 275-280 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
T18 | 492-497 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T11 | 190-195 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
T12 | 275-280 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
T13 | 492-497 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T107 | 53-57 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
T108 | 135-139 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T109 | 407-426 | Disease | denotes | acute renal failure | http://purl.obolibrary.org/obo/MONDO_0002492 |
T110 | 413-426 | Disease | denotes | renal failure | http://purl.obolibrary.org/obo/MONDO_0001106 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T72 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T73 | 63-64 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T74 | 109-115 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
T75 | 240-246 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
T76 | 275-280 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
T77 | 373-375 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
T78 | 373-375 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
T79 | 492-497 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T80 | 492-497 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T83 | 89-91 | Chemical | denotes | Hg | http://purl.obolibrary.org/obo/CHEBI_16170|http://purl.obolibrary.org/obo/CHEBI_25195 |
T85 | 196-209 | Chemical | denotes | galactomannan | http://purl.obolibrary.org/obo/CHEBI_27680 |
T86 | 260-273 | Chemical | denotes | galactomannan | http://purl.obolibrary.org/obo/CHEBI_27680 |
T87 | 373-375 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
T88 | 519-532 | Chemical | denotes | isavuconazole | http://purl.obolibrary.org/obo/CHEBI_85979 |
LitCovid-PD-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
---|---|---|---|---|---|
T4 | 196-209 | GlycoEpitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
T5 | 260-273 | GlycoEpitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T124 | 93-172 | Sentence | denotes | PCR on BALF was tested positive for hMPV, SARS‐CoV‐2 and Aspergillus fumigatus. |
T125 | 173-230 | Sentence | denotes | Two days before, serum galactomannan had turned positive. |
T126 | 231-274 | Sentence | denotes | BALF was tested positive for galactomannan. |
T127 | 275-399 | Sentence | denotes | Chest CT showed ground‐glass opacities with some small nodular infiltrations of up to 1 cm (Video S2, patient #2 Figure 1B). |
T128 | 400-555 | Sentence | denotes | Due to acute renal failure requiring slow low‐efficient daily dialysis (SLEDD) and elevated liver enzymes, intravenous isavuconazole treatment was started. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T43 | 407-426 | Phenotype | denotes | acute renal failure | http://purl.obolibrary.org/obo/HP_0001919 |
T44 | 483-505 | Phenotype | denotes | elevated liver enzymes | http://purl.obolibrary.org/obo/HP_0002910 |