PMC:7265874 / 3250-4194
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T10 | 747-750 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T35 | 244-251 | Disease | denotes | Obesity | http://purl.obolibrary.org/obo/MONDO_0011122 |
| T36 | 369-371 | Disease | denotes | DM | http://purl.obolibrary.org/obo/MONDO_0005015|http://purl.obolibrary.org/obo/MONDO_0016367 |
| T38 | 471-473 | Disease | denotes | DM | http://purl.obolibrary.org/obo/MONDO_0005015|http://purl.obolibrary.org/obo/MONDO_0016367 |
| T40 | 475-482 | Disease | denotes | obesity | http://purl.obolibrary.org/obo/MONDO_0011122 |
| T41 | 606-608 | Disease | denotes | DM | http://purl.obolibrary.org/obo/MONDO_0005015|http://purl.obolibrary.org/obo/MONDO_0016367 |
| T43 | 610-613 | Disease | denotes | CKD | http://purl.obolibrary.org/obo/MONDO_0005300 |
| T44 | 620-639 | Disease | denotes | pemphigus foliaceus | http://purl.obolibrary.org/obo/MONDO_0019324 |
| T45 | 620-629 | Disease | denotes | pemphigus | http://purl.obolibrary.org/obo/MONDO_0006594 |
| T46 | 857-860 | Disease | denotes | AML | http://purl.obolibrary.org/obo/MONDO_0018874 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25 | 158-162 | http://purl.obolibrary.org/obo/CLO_0007489 | denotes | M 86 |
| T26 | 173-174 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T27 | 209-210 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T28 | 263-264 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T29 | 372-373 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T30 | 499-500 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T31 | 640-641 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T32 | 847-849 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T33 | 873-874 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T34 | 912-913 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T36 | 8-10 | Chemical | denotes | ID | http://purl.obolibrary.org/obo/CHEBI_141439 |
| T37 | 98-101 | Chemical | denotes | IPA | http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802 |
| T39 | 184-187 | Chemical | denotes | ETA | http://purl.obolibrary.org/obo/CHEBI_16000|http://purl.obolibrary.org/obo/CHEBI_53460|http://purl.obolibrary.org/obo/CHEBI_71488 |
| T42 | 277-280 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
| T43 | 323-336 | Chemical | denotes | isavuconazole | http://purl.obolibrary.org/obo/CHEBI_85979 |
| T44 | 346-348 | Chemical | denotes | MV | http://purl.obolibrary.org/obo/CHEBI_73616 |
| T45 | 369-371 | Chemical | denotes | DM | http://purl.obolibrary.org/obo/CHEBI_141426 |
| T46 | 386-389 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
| T47 | 471-473 | Chemical | denotes | DM | http://purl.obolibrary.org/obo/CHEBI_141426 |
| T48 | 513-516 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
| T49 | 583-585 | Chemical | denotes | MV | http://purl.obolibrary.org/obo/CHEBI_73616 |
| T50 | 606-608 | Chemical | denotes | DM | http://purl.obolibrary.org/obo/CHEBI_141426 |
| T51 | 654-657 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
| T52 | 724-726 | Chemical | denotes | MV | http://purl.obolibrary.org/obo/CHEBI_73616 |
| T53 | 819-832 | Chemical | denotes | isavuconazole | http://purl.obolibrary.org/obo/CHEBI_85979 |
| T54 | 862-865 | Chemical | denotes | IPA | http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802 |
| T56 | 887-890 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T20 | 98-101 | Phenotype | denotes | IPA | http://purl.obolibrary.org/obo/HP_0020103 |
| T21 | 244-251 | Phenotype | denotes | Obesity | http://purl.obolibrary.org/obo/HP_0001513 |
| T22 | 475-482 | Phenotype | denotes | obesity | http://purl.obolibrary.org/obo/HP_0001513 |
| T23 | 857-860 | Phenotype | denotes | AML | http://purl.obolibrary.org/obo/HP_0004808 |
| T24 | 862-865 | Phenotype | denotes | IPA | http://purl.obolibrary.org/obo/HP_0020103 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29 | 0-155 | Sentence | denotes | Patient ID Sex (M/F) Age Medical history First positive culture CT scan Histological examinationa IPA diagnosis AspICU algorithm Antifungal therapy Outcome |
| T30 | 156-236 | Sentence | denotes | 1 M 86 Hyperchol A. flavus (ETA) No scan available N/A – – None Died, ICU day 10 |
| T31 | 237-361 | Sentence | denotes | 2 M 38 Obesity, hyperchol A. fumigatus (BAL) + Positive Proven Absolute Voriconazole, isavuconazole Alive on MV, ICU day 28b |
| T32 | 362-463 | Sentence | denotes | 3 M 62 DM A. fumigatus (BAL) No scan available Positive Proven Absolute Voriconazole Died, ICU day 20 |
| T33 | 464-598 | Sentence | denotes | 4 M 73 DM, obesity, AHT, hyperchol A. fumigatus (BAL) No scan available Positive Proven Absolute Voriconazole Alive on MV, ICU day 24b |
| T34 | 599-739 | Sentence | denotes | 5 M 77 DM, CKD, AHT, pemphigus foliaceus A. fumigatus (BAL) No scan available Positive Proven Absolute Voriconazole Alive on MV, ICU day 21b |
| T35 | 740-849 | Sentence | denotes | 6 M 55 HIV, AHT, hyperchol Negative No scan available Negative – Voriconazole, isavuconazole Died, ICU day 27 |
| T36 | 850-944 | Sentence | denotes | 7 M 75 AML, IPA (2012) A. fumigatus (BAL) No scan available N/A – Voriconazole Died, ICU day 8 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 55 | 0-7 | Species | denotes | Patient | Tax:9606 |
| 56 | 173-182 | Species | denotes | A. flavus | Tax:5059 |
| 57 | 263-275 | Species | denotes | A. fumigatus | Tax:746128 |
| 58 | 372-384 | Species | denotes | A. fumigatus | Tax:746128 |
| 59 | 499-511 | Species | denotes | A. fumigatus | Tax:746128 |
| 60 | 640-652 | Species | denotes | A. fumigatus | Tax:746128 |
| 61 | 873-885 | Species | denotes | A. fumigatus | Tax:746128 |
| 62 | 220-224 | Disease | denotes | Died | MESH:D003643 |
| 63 | 369-371 | Disease | denotes | DM | MESH:D009223 |
| 64 | 447-451 | Disease | denotes | Died | MESH:D003643 |
| 65 | 471-473 | Disease | denotes | DM | MESH:D009223 |
| 66 | 475-482 | Disease | denotes | obesity | MESH:D009765 |
| 67 | 606-608 | Disease | denotes | DM | MESH:D009223 |
| 68 | 747-750 | Disease | denotes | HIV | MESH:D015658 |
| 69 | 833-837 | Disease | denotes | Died | MESH:D003643 |
| 70 | 857-860 | Disease | denotes | AML | MESH:D015470 |
| 71 | 929-933 | Disease | denotes | Died | MESH:D003643 |