PMC:7258756 / 436-1044
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 15 | 158-162 | Gene | denotes | RdRp | Gene:43740578 |
| 16 | 168-172 | Gene | denotes | RdRp | Gene:43740578 |
| 17 | 181-182 | Gene | denotes | N | Gene:43740575 |
| 18 | 134-135 | Gene | denotes | E | Gene:43740570 |
| 19 | 381-391 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 26 | 510-520 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T2 | 49-55 | Body_part | denotes | Throat | http://purl.org/sig/ont/fma/fma228738 |
| T3 | 136-140 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T4 | 183-187 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T5 | 356-360 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T6 | 546-557 | Body_part | denotes | nucleotides | http://purl.org/sig/ont/fma/fma82740 |
| T7 | 559-566 | Body_part | denotes | genomes | http://purl.org/sig/ont/fma/fma84116 |
| T8 | 602-608 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 49-55 | Body_part | denotes | Throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T11 | 381-389 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T12 | 381-385 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T13 | 510-518 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T14 | 510-514 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 86-87 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T6 | 136-140 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T7 | 183-187 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T8 | 347-348 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T9 | 354-360 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T-cell |
| T10 | 446-447 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T11 | 589-590 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 546-557 | Chemical | denotes | nucleotides | http://purl.obolibrary.org/obo/CHEBI_36976 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 198-219 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | reverse transcription |
| T2 | 206-219 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7 | 40-48 | Sentence | denotes | Methods: |
| T8 | 49-278 | Sentence | denotes | Throat swab/nasal swab specimens for a total of 881 suspected cases were screened by E gene and confirmed by RdRp (1), RdRp (2) and N gene real-time reverse transcription-polymerase chain reactions and next-generation sequencing. |
| T9 | 279-418 | Sentence | denotes | Phylogenetic analysis, molecular characterization and prediction of B- and T-cell epitopes for Indian SARS-CoV-2 sequences were undertaken. |
| T10 | 420-428 | Sentence | denotes | Results: |
| T11 | 429-521 | Sentence | denotes | Three cases with a travel history from Wuhan, China, were confirmed positive for SARS-CoV-2. |