PMC:7258756 / 34511-35103 JSONTXT

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{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7258756","sourcedb":"PMC","sourceid":"7258756","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7258756","text":"From the alignment of the spike protein sequences of SARS CoV-1 and SARS-CoV-2 (Wuhan-Hu1 and India), it can be observed that the three nucleotide-deletion in the case 1 SARS-CoV-2 from India, is located close to the insert 1 region of the SARS CoV-1 (Supplementary Fig. 3 (available from http://www.ijmr.org.in/articles/2020/151/2/images/IndianJMedRes_2020_151_2_200_281471_sm11.pdf)). Notably, case 1 and case 2 were in close contact while travelling to India, but due to the absence of the complete genome of case 2, the genetic relatedness and source of infection could not be pinpointed.","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"519","span":{"begin":86,"end":89},"obj":"Gene"},{"id":"520","span":{"begin":26,"end":31},"obj":"Gene"},{"id":"521","span":{"begin":53,"end":61},"obj":"Species"},{"id":"522","span":{"begin":68,"end":78},"obj":"Species"},{"id":"523","span":{"begin":170,"end":180},"obj":"Species"},{"id":"524","span":{"begin":240,"end":248},"obj":"Species"},{"id":"525","span":{"begin":558,"end":567},"obj":"Disease"}],"attributes":[{"id":"A519","pred":"tao:has_database_id","subj":"519","obj":"Gene:6195"},{"id":"A520","pred":"tao:has_database_id","subj":"520","obj":"Gene:43740568"},{"id":"A521","pred":"tao:has_database_id","subj":"521","obj":"Tax:694009"},{"id":"A522","pred":"tao:has_database_id","subj":"522","obj":"Tax:2697049"},{"id":"A523","pred":"tao:has_database_id","subj":"523","obj":"Tax:2697049"},{"id":"A524","pred":"tao:has_database_id","subj":"524","obj":"Tax:694009"},{"id":"A525","pred":"tao:has_database_id","subj":"525","obj":"MESH:D007239"},{"subj":"519","pred":"source","obj":"LitCovid-PubTator"},{"subj":"520","pred":"source","obj":"LitCovid-PubTator"},{"subj":"521","pred":"source","obj":"LitCovid-PubTator"},{"subj":"522","pred":"source","obj":"LitCovid-PubTator"},{"subj":"523","pred":"source","obj":"LitCovid-PubTator"},{"subj":"524","pred":"source","obj":"LitCovid-PubTator"},{"subj":"525","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T233","span":{"begin":32,"end":39},"obj":"Body_part"},{"id":"T234","span":{"begin":136,"end":146},"obj":"Body_part"},{"id":"T235","span":{"begin":502,"end":508},"obj":"Body_part"}],"attributes":[{"id":"A233","pred":"fma_id","subj":"T233","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A234","pred":"fma_id","subj":"T234","obj":"http://purl.org/sig/ont/fma/fma82740"},{"id":"A235","pred":"fma_id","subj":"T235","obj":"http://purl.org/sig/ont/fma/fma84116"},{"subj":"T233","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T234","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T235","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T185","span":{"begin":53,"end":57},"obj":"Disease"},{"id":"T186","span":{"begin":68,"end":76},"obj":"Disease"},{"id":"T187","span":{"begin":68,"end":72},"obj":"Disease"},{"id":"T188","span":{"begin":170,"end":178},"obj":"Disease"},{"id":"T189","span":{"begin":170,"end":174},"obj":"Disease"},{"id":"T190","span":{"begin":240,"end":244},"obj":"Disease"},{"id":"T191","span":{"begin":558,"end":567},"obj":"Disease"}],"attributes":[{"id":"A185","pred":"mondo_id","subj":"T185","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A186","pred":"mondo_id","subj":"T186","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A187","pred":"mondo_id","subj":"T187","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A188","pred":"mondo_id","subj":"T188","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A189","pred":"mondo_id","subj":"T189","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A190","pred":"mondo_id","subj":"T190","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A191","pred":"mondo_id","subj":"T191","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T185","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T186","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T187","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T188","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T189","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T190","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T191","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T148","span":{"begin":32,"end":39},"obj":"Chemical"},{"id":"T149","span":{"begin":136,"end":146},"obj":"Chemical"}],"attributes":[{"id":"A148","pred":"chebi_id","subj":"T148","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A149","pred":"chebi_id","subj":"T149","obj":"http://purl.obolibrary.org/obo/CHEBI_36976"},{"subj":"T148","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T149","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T230","span":{"begin":0,"end":386},"obj":"Sentence"},{"id":"T231","span":{"begin":387,"end":592},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T230","pred":"source","obj":"LitCovid-sentences"},{"subj":"T231","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute 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