> top > docs > PMC:7258756 > spans > 16141-16945 > annotations

PMC:7258756 / 16141-16945 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
239 269-272 Gene denotes Hu1 Gene:6195
240 45-55 Species denotes SARS-CoV-2 Tax:2697049
241 346-356 Species denotes SARS-CoV-2 Tax:2697049
242 405-420 Species denotes Betacoronavirus Tax:694002
243 617-627 Species denotes SARS-CoV-2 Tax:2697049
244 705-715 Species denotes SARS-CoV-2 Tax:2697049
245 747-757 Species denotes SARS-CoV-2 Tax:2697049

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T80 25-31 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T81 118-120 Body_part denotes nt http://purl.org/sig/ont/fma/fma82740
T82 125-127 Body_part denotes aa http://purl.org/sig/ont/fma/fma82739
T83 300-302 Body_part denotes nt http://purl.org/sig/ont/fma/fma82740
T84 322-324 Body_part denotes aa http://purl.org/sig/ont/fma/fma82739
T85 481-483 Body_part denotes nt http://purl.org/sig/ont/fma/fma82740
T86 544-550 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T129 45-53 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T130 45-49 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T131 346-354 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T132 346-350 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T133 617-625 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T134 617-621 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T135 705-713 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T136 705-709 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T137 747-755 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T138 747-751 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T111 125-127 http://purl.obolibrary.org/obo/CLO_0001627 denotes aa
T112 322-324 http://purl.obolibrary.org/obo/CLO_0001627 denotes aa
T113 758-765 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T69 118-120 Chemical denotes nt http://purl.obolibrary.org/obo/CHEBI_36976
T70 125-127 Chemical denotes aa http://purl.obolibrary.org/obo/CHEBI_33709
T71 300-302 Chemical denotes nt http://purl.obolibrary.org/obo/CHEBI_36976
T72 322-324 Chemical denotes aa http://purl.obolibrary.org/obo/CHEBI_33709
T73 481-483 Chemical denotes nt http://purl.obolibrary.org/obo/CHEBI_36976

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T123 0-209 Sentence denotes Analysis of the complete genome sequences of SARS-CoV-2 from the positive cases in India revealed that the percentage nt and aa differences between case 1 and case 3 were 0.038 and 0.10 per cent, respectively.
T124 210-338 Sentence denotes The sequences of case 1 and case 3 diverged from the Wuhan-Hu1 sequence by 0.017 per cent nt and 0.041 per cent aa respectively.
T125 339-486 Sentence denotes Indian SARS-CoV-2 clustered with the Sarbecovirus subgenus of the Betacoronavirus genus and was closest to the BatCoV RaTG13 sequence (96.09% nt)8.
T126 487-647 Sentence denotes The phylogenetic comparison showed the clustering of the genome sequences of case 1 and case 3 with the existing sequences of the SARS-CoV-2 sequences (Fig. 1).
T127 648-735 Sentence denotes The phylogeny revealed emerging heterogeneity within the SARS-CoV-2 sequences globally.
T128 736-804 Sentence denotes The Indian SARS-CoV-2 viruses were positioned in different clusters.

2_test

Id Subject Object Predicate Lexical cue
32242873-32004758-47036569 484-485 32004758 denotes 8
T6574 484-485 32004758 denotes 8