PMC:7258756 / 15505-16140
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 228 | 448-452 | Gene | denotes | Hu-1 | Gene:6195 |
| 229 | 7-17 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 230 | 463-473 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 231 | 425-434 | Disease | denotes | pneumonia | MESH:D011014 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T77 | 143-149 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
| T78 | 474-480 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
| T79 | 574-580 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T122 | 7-15 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T123 | 7-11 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T124 | 107-109 | Disease | denotes | TS | http://purl.obolibrary.org/obo/MONDO_0010979|http://purl.obolibrary.org/obo/MONDO_0016455 |
| T126 | 425-434 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T127 | 463-471 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T128 | 463-467 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T110 | 435-440 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T68 | 107-109 | Chemical | denotes | TS | http://purl.obolibrary.org/obo/CHEBI_73664 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T119 | 0-183 | Sentence | denotes | NGS of SARS-CoV-2 from India - Phylogenetic analysis and molecular characterization: NGS analysis from the TS specimens retrieved two complete genome sequences from case 1 and case 3. |
| T120 | 184-353 | Sentence | denotes | The complete genomic sequence data for case 2 could not be recovered due to the lower kappa concentration of the sample and hence not included in the study for analysis. |
| T121 | 354-513 | Sentence | denotes | The FastQ files were reference mapped with the available Wuhan seafood pneumonia virus (Wuhan Hu-1) complete SARS-CoV-2 genome (accession number: NC 045512.2). |
| T122 | 514-635 | Sentence | denotes | The total reads which were mapped and the percentage of the genome recovered for the two cases are summarized in Table I. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T9 | 425-434 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |