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PMC:7253482 / 8288-8627 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
230 3-15 Chemical denotes Oligomannose
231 21-28 Chemical denotes glycans MESH:D011134
232 62-69 Chemical denotes mannose MESH:D008358
233 100-106 Chemical denotes GlcNAc MESH:D000117
308 211-222 Species denotes coronavirus Tax:11118
310 172-188 Chemical denotes N-linked glycans
311 190-196 Chemical denotes glycan MESH:D011134

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T54 62-69 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801
T55 225-232 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T49 319-321 http://purl.obolibrary.org/obo/UBERON_0003064 denotes IM
T50 326-328 http://purl.obolibrary.org/obo/CLO_0007874 denotes MS

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T79 21-28 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T80 62-69 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T81 100-106 Chemical denotes GlcNAc http://purl.obolibrary.org/obo/CHEBI_506227|http://purl.obolibrary.org/obo/CHEBI_73685
T83 181-188 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T84 225-232 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T85 259-262 Chemical denotes ion http://purl.obolibrary.org/obo/CHEBI_24870
T86 263-266 Chemical denotes ion http://purl.obolibrary.org/obo/CHEBI_24870
T87 319-321 Chemical denotes IM http://purl.obolibrary.org/obo/CHEBI_74073
T88 326-328 Chemical denotes MS http://purl.obolibrary.org/obo/CHEBI_73613

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1177 3-20 JJ denotes Oligomannose-type
T1178 21-28 NNS denotes glycans
T1179 29-32 VBP denotes are
T1180 33-46 RB denotes schematically
T1181 47-56 VBN denotes annotated
T1182 57-61 IN denotes with
T1183 62-69 NN denotes mannose
T1184 70-78 NNS denotes residues
T1185 79-81 IN denotes as
T1186 82-87 JJ denotes green
T1187 88-95 NNS denotes circles
T1188 96-99 CC denotes and
T1189 100-106 NN denotes GlcNAc
T1190 107-115 NNS denotes residues
T1191 116-118 IN denotes as
T1192 119-123 JJ denotes blue
T1193 124-131 NNS denotes squares
T1194 133-135 TO denotes To
T1195 136-145 VB denotes ascertain
T1196 146-149 DT denotes the
T1197 150-157 JJ denotes precise
T1198 158-168 NNS denotes structures
T1199 169-171 IN denotes of
T1200 172-180 JJ denotes N-linked
T1201 181-188 NNS denotes glycans
T1202 188-189 -COMMA- denotes ,
T1203 190-196 NN denotes glycan
T1204 197-202 NNS denotes pools
T1205 203-205 IN denotes of
T1206 206-210 DT denotes each
T1207 211-222 NN denotes coronavirus
T1208 223-224 NN denotes S
T1209 225-232 NN denotes protein
T1210 233-237 VBD denotes were
T1211 238-246 VBN denotes analysed
T1212 247-249 IN denotes by
T1213 250-262 JJ denotes negative-ion
T1214 263-288 NN denotes ion-mobility-electrospray
T1215 289-299 NN denotes ionisation
T1216 300-304 NN denotes mass
T1217 305-317 NN denotes spectrometry
T1218 318-319 -LRB- denotes (
T1219 319-325 NN denotes IM-ESI
T1220 326-328 NN denotes MS
T1221 328-329 -RRB- denotes )
T1222 330-331 -LRB- denotes (
R1183 T1178 T1177 arg1Of glycans,Oligomannose-type
R1184 T1178 T1179 arg1Of glycans,are
R1185 T1181 T1179 arg2Of annotated,are
R1186 T1181 T1180 arg1Of annotated,schematically
R1187 T1178 T1181 arg2Of glycans,annotated
R1188 T1181 T1182 arg1Of annotated,with
R1189 T1184 T1182 arg2Of residues,with
R1190 T1184 T1183 arg1Of residues,mannose
R1191 T1181 T1185 arg1Of annotated,as
R1192 T1188 T1185 arg2Of and,as
R1193 T1187 T1186 arg1Of circles,green
R1194 T1187 T1188 arg1Of circles,and
R1195 T1190 T1188 arg2Of residues,and
R1196 T1190 T1189 arg1Of residues,GlcNAc
R1197 T1181 T1191 arg1Of annotated,as
R1198 T1193 T1191 arg2Of squares,as
R1199 T1193 T1192 arg1Of squares,blue
R1200 T1195 T1194 arg1Of ascertain,To
R1201 T1211 T1194 modOf analysed,To
R1202 T1198 T1195 arg2Of structures,ascertain
R1203 T1198 T1196 arg1Of structures,the
R1204 T1198 T1197 arg1Of structures,precise
R1205 T1198 T1199 arg1Of structures,of
R1206 T1201 T1199 arg2Of glycans,of
R1207 T1201 T1200 arg1Of glycans,N-linked
R1208 T1211 T1202 arg1Of analysed,","
R1209 T1204 T1203 arg1Of pools,glycan
R1210 T1204 T1205 arg1Of pools,of
R1211 T1209 T1205 arg2Of protein,of
R1212 T1209 T1206 arg1Of protein,each
R1213 T1209 T1207 arg1Of protein,coronavirus
R1214 T1209 T1208 arg1Of protein,S
R1215 T1204 T1210 arg1Of pools,were
R1216 T1211 T1210 arg2Of analysed,were
R1217 T1217 T1211 arg1Of spectrometry,analysed
R1218 T1204 T1211 arg2Of pools,analysed
R1219 T1217 T1212 arg2Of spectrometry,by
R1220 T1217 T1213 arg1Of spectrometry,negative-ion
R1221 T1217 T1214 arg1Of spectrometry,ion-mobility-electrospray
R1222 T1217 T1215 arg1Of spectrometry,ionisation
R1223 T1217 T1216 arg1Of spectrometry,mass
R1224 T1217 T1218 arg1Of spectrometry,(
R1225 T1220 T1218 arg2Of MS,(
R1226 T1221 T1218 arg3Of ),(
R1227 T1220 T1219 arg1Of MS,IM-ESI
R1228 T1217 T1222 arg1Of spectrometry,(

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T54 62-69 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801
T55 225-232 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T65 21-28 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T66 62-69 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T67 100-106 Chemical denotes GlcNAc http://purl.obolibrary.org/obo/CHEBI_506227|http://purl.obolibrary.org/obo/CHEBI_73685
T69 181-188 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T70 225-232 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T71 259-262 Chemical denotes ion http://purl.obolibrary.org/obo/CHEBI_24870
T72 263-266 Chemical denotes ion http://purl.obolibrary.org/obo/CHEBI_24870

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T46 3-132 Sentence denotes Oligomannose-type glycans are schematically annotated with mannose residues as green circles and GlcNAc residues as blue squares.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
230 3-15 Chemical denotes Oligomannose
231 21-28 Chemical denotes glycans MESH:D011134
232 62-69 Chemical denotes mannose MESH:D008358
233 100-106 Chemical denotes GlcNAc MESH:D000117
310 172-188 Chemical denotes N-linked glycans
311 190-196 Chemical denotes glycan MESH:D011134
308 211-222 Species denotes coronavirus Tax:11118

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2581 223-232 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T2614 322-325 Protein denotes ESI https://www.uniprot.org/uniprot/Q6FG74|https://www.uniprot.org/uniprot/P19957|https://www.uniprot.org/uniprot/E1P618

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T46 3-132 Sentence denotes Oligomannose-type glycans are schematically annotated with mannose residues as green circles and GlcNAc residues as blue squares.

LitCovid-sample-Glycan

Id Subject Object Predicate Lexical cue
T1 62-69 http://rdf.glyconavi.org/CarTNa/CarTNa218/trivialname denotes mannose
T2 100-106 https://glytoucan.org/Structures/Glycans/G26693XF denotes GlcNAc
T3 100-106 https://glytoucan.org/Structures/Glycans/G01864SU denotes GlcNAc
T4 100-106 https://glytoucan.org/Structures/Glycans/G85391SA denotes GlcNAc
T5 100-106 https://glytoucan.org/Structures/Glycans/G41950LU denotes GlcNAc
T6 100-106 https://glytoucan.org/Structures/Glycans/G57195RJ denotes GlcNAc
T7 100-106 https://glytoucan.org/Structures/Glycans/G17605FD denotes GlcNAc
T8 100-106 https://glytoucan.org/Structures/Glycans/G54644LT denotes GlcNAc
T9 100-106 https://glytoucan.org/Structures/Glycans/G89565QL denotes GlcNAc
T10 100-106 https://glytoucan.org/Structures/Glycans/G55978NL denotes GlcNAc
T11 100-106 https://glytoucan.org/Structures/Glycans/G25126RB denotes GlcNAc
T12 100-106 https://glytoucan.org/Structures/Glycans/G25694UG denotes GlcNAc
T13 100-106 https://glytoucan.org/Structures/Glycans/G80869MR denotes GlcNAc
T14 100-106 https://glytoucan.org/Structures/Glycans/G51848AD denotes GlcNAc
T15 100-106 https://glytoucan.org/Structures/Glycans/G94667GM denotes GlcNAc
T16 100-106 https://glytoucan.org/Structures/Glycans/G30124BO denotes GlcNAc
T17 100-106 https://glytoucan.org/Structures/Glycans/G82777EZ denotes GlcNAc
T18 100-106 https://glytoucan.org/Structures/Glycans/G10151YZ denotes GlcNAc
T19 100-106 https://glytoucan.org/Structures/Glycans/G17585ZM denotes GlcNAc
T20 100-106 https://glytoucan.org/Structures/Glycans/G38254HJ denotes GlcNAc
T21 100-106 https://glytoucan.org/Structures/Glycans/G04411CJ denotes GlcNAc
T22 100-106 https://glytoucan.org/Structures/Glycans/G70374VG denotes GlcNAc
T23 100-106 https://glytoucan.org/Structures/Glycans/G30874VW denotes GlcNAc
T24 100-106 https://glytoucan.org/Structures/Glycans/G45176LJ denotes GlcNAc
T25 100-106 https://glytoucan.org/Structures/Glycans/G75188FS denotes GlcNAc
T26 100-106 https://glytoucan.org/Structures/Glycans/G69333MI denotes GlcNAc
T27 100-106 https://glytoucan.org/Structures/Glycans/G10676XO denotes GlcNAc
T28 100-106 https://glytoucan.org/Structures/Glycans/G14843DJ denotes GlcNAc
T29 100-106 https://glytoucan.org/Structures/Glycans/G47546FR denotes GlcNAc
T30 100-106 https://glytoucan.org/Structures/Glycans/G73695ZM denotes GlcNAc
T31 100-106 https://glytoucan.org/Structures/Glycans/G40745NH denotes GlcNAc
T32 100-106 https://glytoucan.org/Structures/Glycans/G31923TJ denotes GlcNAc
T33 100-106 https://glytoucan.org/Structures/Glycans/G60519EP denotes GlcNAc
T34 100-106 https://glytoucan.org/Structures/Glycans/G07933IA denotes GlcNAc
T35 100-106 https://glytoucan.org/Structures/Glycans/G54496YV denotes GlcNAc
T36 100-106 https://glytoucan.org/Structures/Glycans/G70070AY denotes GlcNAc
T37 100-106 https://glytoucan.org/Structures/Glycans/G62953SQ denotes GlcNAc
T38 100-106 https://glytoucan.org/Structures/Glycans/G25238AV denotes GlcNAc
T39 100-106 https://glytoucan.org/Structures/Glycans/G40510DP denotes GlcNAc
T40 100-106 https://glytoucan.org/Structures/Glycans/G61120TK denotes GlcNAc
T41 100-106 https://glytoucan.org/Structures/Glycans/G81830JX denotes GlcNAc
T42 100-106 https://glytoucan.org/Structures/Glycans/G01591HR denotes GlcNAc
T43 100-106 https://glytoucan.org/Structures/Glycans/G90703NA denotes GlcNAc
T44 100-106 https://glytoucan.org/Structures/Glycans/G56520XN denotes GlcNAc
T45 100-106 https://glytoucan.org/Structures/Glycans/G41342KV denotes GlcNAc