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PMC:7253482 / 7751-8079 JSON TXT

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LitCovid-PubTator

Id	Subject	Object	Predicate	Lexical cue	tao:has_database_id
224	284-300	Chemical	denotes	N-linked glycans
236	306-310	Disease	denotes	SARS	MESH:D045169
237	312-316	Disease	denotes	MERS	MESH:D018352

LitCovid-PD-FMA-UBERON

Id	Subject	Object	Predicate	Lexical cue	fma_id
T52	21-34	Body_part	denotes	glycoproteins	http://purl.org/sig/ont/fma/fma62925
T53	188-193	Body_part	denotes	helix	http://purl.org/sig/ont/fma/fma60992

LitCovid-PD-UBERON

Id	Subject	Object	Predicate	Lexical cue	uberon_id
T2	188-193	Body_part	denotes	helix	http://purl.obolibrary.org/obo/UBERON_0002488

LitCovid-PD-MONDO

Id	Subject	Object	Predicate	Lexical cue	mondo_id
T30	71-74	Disease	denotes	NTD	http://purl.obolibrary.org/obo/MONDO_0008449\|http://purl.obolibrary.org/obo/MONDO_0018075
T32	306-310	Disease	denotes	SARS	http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id	Subject	Object	Predicate	Lexical cue
T43	124-127	http://purl.obolibrary.org/obo/CLO_0008975	denotes	SD1
T44	139-146	http://purl.obolibrary.org/obo/PR_000018263	denotes	peptide
T45	231-232	http://purl.obolibrary.org/obo/CLO_0001021	denotes	b
T46	275-283	http://purl.obolibrary.org/obo/CLO_0007225	denotes	labelled

LitCovid-PD-CHEBI

Id	Subject	Object	Predicate	Lexical cue	chebi_id
T69	21-34	Chemical	denotes	glycoproteins	http://purl.obolibrary.org/obo/CHEBI_17089
T70	139-146	Chemical	denotes	peptide	http://purl.obolibrary.org/obo/CHEBI_16670
T71	148-150	Chemical	denotes	FP	http://purl.obolibrary.org/obo/CHEBI_74750
T72	226-228	Chemical	denotes	TM	http://purl.obolibrary.org/obo/CHEBI_55460\|http://purl.obolibrary.org/obo/CHEBI_74861
T74	293-300	Chemical	denotes	glycans	http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-FMA

Id	Subject	Object	Predicate	Lexical cue	fma_id
T52	21-34	Body_part	denotes	glycoproteins	http://purl.org/sig/ont/fma/fma62925
T53	188-193	Body_part	denotes	helix	http://purl.org/sig/ont/fma/fma60992

LitCovid-sample-CHEBI

Id	Subject	Object	Predicate	Lexical cue	chebi_id
T59	21-34	Chemical	denotes	glycoproteins	http://purl.obolibrary.org/obo/CHEBI_17089
T60	139-146	Chemical	denotes	peptide	http://purl.obolibrary.org/obo/CHEBI_16670
T61	293-300	Chemical	denotes	glycans	http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-NCBITaxon

Id	Subject	Object	Predicate	Lexical cue	ncbi_taxonomy_id
T58	306-310	Species	denotes	SARS	NCBItxid:694009
T59	312-316	Species	denotes	MERS	NCBItxid:1335626

LitCovid-sample-sentences

Id	Subject	Object	Predicate	Lexical cue
T44	0-328	Sentence	denotes	The domains of the S glycoproteins are illustrated: N-terminal domain (NTD), receptor-binding domain (RBD), sub-domain 1/2 (SD1/2), fusion peptide (FP), heptad repeat 1/2 (HR1/2), central helix (CH), and transmembrane domain (TM). b HILIC-UPLC chromatograms of fluorescently labelled N-linked glycans from SARS, MERS and HKU1 S.

LitCovid-sample-PD-UBERON

Id	Subject	Object	Predicate	Lexical cue	uberon_id
T2	188-193	Body_part	denotes	helix	http://purl.obolibrary.org/obo/UBERON_0002488

LitCovid-sample-PD-MONDO

Id	Subject	Object	Predicate	Lexical cue	mondo_id
T30	306-310	Disease	denotes	SARS	http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id	Subject	Object	Predicate	Lexical cue	pubann:denotes
224	284-300	Chemical	denotes	N-linked glycans
236	306-310	Disease	denotes	SARS	MESH:D045169
237	312-316	Disease	denotes	MERS	MESH:D018352

LitCovid-sample-UniProt

Id	Subject	Object	Predicate	Lexical cue	uniprot_id
T2473	19-34	Protein	denotes	S glycoproteins	https://www.uniprot.org/uniprot/Q9QAS2\|https://www.uniprot.org/uniprot/Q9QAR5\|https://www.uniprot.org/uniprot/Q9QAQ8\|https://www.uniprot.org/uniprot/Q9IW04\|https://www.uniprot.org/uniprot/Q9IKD1\|https://www.uniprot.org/uniprot/Q990M4\|https://www.uniprot.org/uniprot/Q990M3\|https://www.uniprot.org/uniprot/Q990M2\|https://www.uniprot.org/uniprot/Q990M1\|https://www.uniprot.org/uniprot/Q91AV1\|https://www.uniprot.org/uniprot/Q91A26\|https://www.uniprot.org/uniprot/Q8V436\|https://www.uniprot.org/uniprot/Q8JSP8\|https://www.uniprot.org/uniprot/Q8BB25\|https://www.uniprot.org/uniprot/Q86623\|https://www.uniprot.org/uniprot/Q85088\|https://www.uniprot.org/uniprot/Q85087\|https://www.uniprot.org/uniprot/Q80BV6\|https://www.uniprot.org/uniprot/Q7TFB1\|https://www.uniprot.org/uniprot/Q7TFA2\|https://www.uniprot.org/uniprot/Q7TA19\|https://www.uniprot.org/uniprot/Q7T6T3\|https://www.uniprot.org/uniprot/Q7T696\|https://www.uniprot.org/uniprot/Q77NC4\|https://www.uniprot.org/uniprot/Q6TNF9\|https://www.uniprot.org/uniprot/Q6R1L7\|https://www.uniprot.org/uniprot/Q6QU82\|https://www.uniprot.org/uniprot/Q6Q1S2\|https://www.uniprot.org/uniprot/Q696Q6\|https://www.uniprot.org/uniprot/Q66291\|https://www.uniprot.org/uniprot/Q66290\|https://www.uniprot.org/uniprot/Q66199\|https://www.uniprot.org/uniprot/Q66177\|https://www.uniprot.org/uniprot/Q66176\|https://www.uniprot.org/uniprot/Q66174\|https://www.uniprot.org/uniprot/Q65984\|https://www.uniprot.org/uniprot/Q5MQD0\|https://www.uniprot.org/uniprot/Q5I5X9\|https://www.uniprot.org/uniprot/Q5DIY0\|https://www.uniprot.org/uniprot/Q5DIX9\|https://www.uniprot.org/uniprot/Q5DIX8\|https://www.uniprot.org/uniprot/Q5DIX7\|https://www.uniprot.org/uniprot/Q52PA3\|https://www.uniprot.org/uniprot/Q4ZJS1\|https://www.uniprot.org/uniprot/Q4U5G0\|https://www.uniprot.org/uniprot/Q3T8J0\|https://www.uniprot.org/uniprot/Q3LZX1\|https://www.uniprot.org/uniprot/Q3I5J5\|https://www.uniprot.org/uniprot/Q14EB0\|https://www.uniprot.org/uniprot/Q0ZME7\|https://www.uniprot.org/uniprot/Q0Q4F2\|https://www.uniprot.org/uniprot/Q0Q475\|https://www.uniprot.org/uniprot/Q0Q466\|https://www.uniprot.org/uniprot/Q0GNB8\|https://www.uniprot.org/uniprot/Q02385\|https://www.uniprot.org/uniprot/Q02167\|https://www.uniprot.org/uniprot/Q01977\|https://www.uniprot.org/uniprot/Q008X4\|https://www.uniprot.org/uniprot/P89344\|https://www.uniprot.org/uniprot/P89343\|https://www.uniprot.org/uniprot/P89342\|https://www.uniprot.org/uniprot/P59594\|https://www.uniprot.org/uniprot/P36334\|https://www.uniprot.org/uniprot/P36300\|https://www.uniprot.org/uniprot/P33470\|https://www.uniprot.org/uniprot/P30208\|https://www.uniprot.org/uniprot/P30207\|https://www.uniprot.org/uniprot/P30206\|https://www.uniprot.org/uniprot/P30019\|https://www.uniprot.org/uniprot/P27655\|https://www.uniprot.org/uniprot/P25194\|https://www.uniprot.org/uniprot/P25193\|https://www.uniprot.org/uniprot/P25192\|https://www.uniprot.org/uniprot/P25191\|https://www.uniprot.org/uniprot/P25190\|https://www.uniprot.org/uniprot/P24413\|https://www.uniprot.org/uniprot/P23052\|https://www.uniprot.org/uniprot/P22432\|https://www.uniprot.org/uniprot/P18450\|https://www.uniprot.org/uniprot/P17662\|https://www.uniprot.org/uniprot/P15777\|https://www.uniprot.org/uniprot/P15423\|https://www.uniprot.org/uniprot/P12722\|https://www.uniprot.org/uniprot/P12651\|https://www.uniprot.org/uniprot/P12650\|https://www.uniprot.org/uniprot/P11225\|https://www.uniprot.org/uniprot/P11224\|https://www.uniprot.org/uniprot/P11223\|https://www.uniprot.org/uniprot/P10033\|https://www.uniprot.org/uniprot/P0DTC2\|https://www.uniprot.org/uniprot/P07946\|https://www.uniprot.org/uniprot/P05135\|https://www.uniprot.org/uniprot/P05134\|https://www.uniprot.org/uniprot/O90304\|https://www.uniprot.org/uniprot/O39227\|https://www.uniprot.org/uniprot/K9N5Q8\|https://www.uniprot.org/uniprot/A3EXG6\|https://www.uniprot.org/uniprot/A3EXD0\|https://www.uniprot.org/uniprot/A3EX94
T2572	102-105	Protein	denotes	RBD	https://www.uniprot.org/uniprot/Q63492\|https://www.uniprot.org/uniprot/Q63491\|https://www.uniprot.org/uniprot/Q62815\|https://www.uniprot.org/uniprot/Q62691\|https://www.uniprot.org/uniprot/Q01542\|https://www.uniprot.org/uniprot/P27732\|https://www.uniprot.org/uniprot/O09024\|https://www.uniprot.org/uniprot/O09023\|https://www.uniprot.org/uniprot/O09022

LitCovid-sentences

Id	Subject	Object	Predicate	Lexical cue
T44	0-328	Sentence	denotes	The domains of the S glycoproteins are illustrated: N-terminal domain (NTD), receptor-binding domain (RBD), sub-domain 1/2 (SD1/2), fusion peptide (FP), heptad repeat 1/2 (HR1/2), central helix (CH), and transmembrane domain (TM). b HILIC-UPLC chromatograms of fluorescently labelled N-linked glycans from SARS, MERS and HKU1 S.