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PMC:7253482 / 7503-8420 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
205 53-60 Chemical denotes glycans MESH:D011134
206 33-37 Disease denotes SARS MESH:D045169
207 39-43 Disease denotes MERS MESH:D018352
223 112-123 Species denotes coronavirus Tax:11118
224 532-548 Chemical denotes N-linked glycans
225 577-589 Chemical denotes Oligomannose
226 595-602 Chemical denotes glycans MESH:D011134
227 614-637 Chemical denotes Man5GlcNAc2–Man9GlcNAc2
228 664-671 Chemical denotes glycans MESH:D011134
229 748-754 Chemical denotes glycan MESH:D011134
230 788-800 Chemical denotes Oligomannose
231 806-813 Chemical denotes glycans MESH:D011134
232 847-854 Chemical denotes mannose MESH:D008358
233 885-891 Chemical denotes GlcNAc MESH:D000117
234 92-96 Disease denotes SARS MESH:D045169
235 98-102 Disease denotes MERS MESH:D018352
236 554-558 Disease denotes SARS MESH:D045169
237 560-564 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T50 126-139 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T51 189-199 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T52 269-282 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T53 436-441 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T54 847-854 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 436-441 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T28 33-37 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T29 92-96 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T30 319-322 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075
T32 554-558 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T33 777-780 Disease denotes pie http://purl.obolibrary.org/obo/MONDO_0000923

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T42 62-63 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T43 372-375 http://purl.obolibrary.org/obo/CLO_0008975 denotes SD1
T44 387-394 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T45 479-480 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T46 523-531 http://purl.obolibrary.org/obo/CLO_0007225 denotes labelled
T47 610-612 http://purl.obolibrary.org/obo/CLO_0007490 denotes M9
T48 775-776 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T65 53-60 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T66 126-139 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T67 189-194 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T68 195-199 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T69 269-282 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T70 387-394 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T71 396-398 Chemical denotes FP http://purl.obolibrary.org/obo/CHEBI_74750
T72 474-476 Chemical denotes TM http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861
T74 541-548 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T75 595-602 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T76 610-612 Chemical denotes M9 http://purl.obolibrary.org/obo/CHEBI_140164
T77 664-671 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T78 673-680 Chemical denotes magenta http://purl.obolibrary.org/obo/CHEBI_87661
T79 806-813 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T80 847-854 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T81 885-891 Chemical denotes GlcNAc http://purl.obolibrary.org/obo/CHEBI_506227|http://purl.obolibrary.org/obo/CHEBI_73685

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1135 0-4 NNP denotes Fig.
T1136 5-6 CD denotes 1
T1137 7-20 JJ denotes Compositional
T1138 21-29 NN denotes analysis
T1139 30-32 IN denotes of
T1140 33-37 NNP denotes SARS
T1141 37-38 -COMMA- denotes ,
T1142 39-43 NNS denotes MERS
T1143 44-47 CC denotes and
T1144 48-52 NN denotes HKU1
T1145 53-60 NNS denotes glycans
T1146 62-63 DT denotes a
T1147 64-73 JJ denotes Schematic
T1148 74-88 NN denotes representation
T1149 89-91 IN denotes of
T1150 92-96 NNP denotes SARS
T1151 96-97 -COMMA- denotes ,
T1152 98-102 NNS denotes MERS
T1153 103-106 CC denotes and
T1154 107-111 NN denotes HKU1
T1155 112-123 NN denotes coronavirus
T1156 124-125 NN denotes S
T1157 126-139 NNS denotes glycoproteins
T1158 139-140 -COMMA- denotes ,
T1159 141-148 VBG denotes showing
T1160 149-152 DT denotes the
T1161 153-162 NNS denotes positions
T1162 163-165 IN denotes of
T1163 166-174 JJ denotes N-linked
T1164 175-188 NN denotes glycosylation
T1165 189-199 JJ denotes amino-acid
T1166 200-207 NNS denotes sequons
T1167 208-209 -LRB- denotes (
T1168 209-214 NN denotes NXS/T
T1169 214-215 -COMMA- denotes ,
T1170 216-221 WRB denotes where
T1171 222-227 NN denotes X ≠ P
T1172 227-228 -RRB- denotes )
T1173 229-234 VBN denotes shown
T1174 235-237 IN denotes as
T1175 238-246 NNS denotes branches
T1177 788-805 JJ denotes Oligomannose-type
T1178 806-813 NNS denotes glycans
T1179 814-817 VBP denotes are
T1180 818-831 RB denotes schematically
T1181 832-841 VBN denotes annotated
T1182 842-846 IN denotes with
T1183 847-854 NN denotes mannose
T1184 855-863 NNS denotes residues
T1185 864-866 IN denotes as
T1186 867-872 JJ denotes green
T1187 873-880 NNS denotes circles
T1188 881-884 CC denotes and
T1189 885-891 NN denotes GlcNAc
T1190 892-900 NNS denotes residues
T1191 901-903 IN denotes as
T1192 904-908 JJ denotes blue
T1193 909-916 NNS denotes squares
R1144 T1138 T1135 arg1Of analysis,Fig.
R1145 T1135 T1136 arg1Of Fig.,1
R1146 T1138 T1137 arg1Of analysis,Compositional
R1147 T1138 T1139 arg1Of analysis,of
R1148 T1140 T1139 arg2Of SARS,of
R1149 T1140 T1141 arg1Of SARS,","
R1150 T1143 T1141 arg2Of and,","
R1151 T1142 T1143 arg1Of MERS,and
R1152 T1145 T1143 arg2Of glycans,and
R1153 T1145 T1144 arg1Of glycans,HKU1
R1154 T1148 T1146 arg1Of representation,a
R1155 T1148 T1147 arg1Of representation,Schematic
R1156 T1148 T1149 arg1Of representation,of
R1157 T1153 T1149 arg2Of and,of
R1158 T1150 T1151 arg1Of SARS,","
R1159 T1152 T1151 arg2Of MERS,","
R1160 T1151 T1153 arg1Of ",",and
R1161 T1157 T1153 arg2Of glycoproteins,and
R1162 T1157 T1154 arg1Of glycoproteins,HKU1
R1163 T1157 T1155 arg1Of glycoproteins,coronavirus
R1164 T1157 T1156 arg1Of glycoproteins,S
R1165 T1148 T1158 arg1Of representation,","
R1166 T1148 T1159 arg1Of representation,showing
R1167 T1161 T1159 arg2Of positions,showing
R1168 T1161 T1160 arg1Of positions,the
R1169 T1161 T1162 arg1Of positions,of
R1170 T1166 T1162 arg2Of sequons,of
R1171 T1166 T1163 arg1Of sequons,N-linked
R1172 T1166 T1164 arg1Of sequons,glycosylation
R1173 T1166 T1165 arg1Of sequons,amino-acid
R1174 T1166 T1167 arg1Of sequons,(
R1175 T1168 T1167 arg2Of NXS/T,(
R1176 T1172 T1167 arg3Of ),(
R1177 T1168 T1169 arg1Of NXS/T,","
R1178 T1171 T1170 arg1Of X ≠ P,where
R1179 T1168 T1171 arg1Of NXS/T,X ≠ P
R1180 T1166 T1173 arg2Of sequons,shown
R1181 T1173 T1174 arg1Of shown,as
R1182 T1175 T1174 arg2Of branches,as
R1183 T1178 T1177 arg1Of glycans,Oligomannose-type
R1184 T1178 T1179 arg1Of glycans,are
R1185 T1181 T1179 arg2Of annotated,are
R1186 T1181 T1180 arg1Of annotated,schematically
R1187 T1178 T1181 arg2Of glycans,annotated
R1188 T1181 T1182 arg1Of annotated,with
R1189 T1184 T1182 arg2Of residues,with
R1190 T1184 T1183 arg1Of residues,mannose
R1191 T1181 T1185 arg1Of annotated,as
R1192 T1188 T1185 arg2Of and,as
R1193 T1187 T1186 arg1Of circles,green
R1194 T1187 T1188 arg1Of circles,and
R1195 T1190 T1188 arg2Of residues,and
R1196 T1190 T1189 arg1Of residues,GlcNAc
R1197 T1181 T1191 arg1Of annotated,as
R1198 T1193 T1191 arg2Of squares,as
R1199 T1193 T1192 arg1Of squares,blue

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T50 126-139 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T51 189-199 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T52 269-282 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T53 436-441 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T54 847-854 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T56 53-60 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T57 126-139 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T58 189-194 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T59 269-282 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T60 387-394 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T61 541-548 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T62 595-602 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T63 664-671 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T64 673-680 Chemical denotes magenta http://purl.obolibrary.org/obo/CHEBI_87661
T65 806-813 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T66 847-854 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T67 885-891 Chemical denotes GlcNAc http://purl.obolibrary.org/obo/CHEBI_506227|http://purl.obolibrary.org/obo/CHEBI_73685

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T53 33-37 Species denotes SARS NCBItxid:694009
T54 39-43 Species denotes MERS NCBItxid:1335626
T55 92-96 Species denotes SARS NCBItxid:694009
T56 98-102 Species denotes MERS NCBItxid:1335626
T57 107-123 Species denotes HKU1 coronavirus NCBItxid:290028
T58 554-558 Species denotes SARS NCBItxid:694009
T59 560-564 Species denotes MERS NCBItxid:1335626

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T42 0-61 Sentence denotes Fig. 1 Compositional analysis of SARS, MERS and HKU1 glycans.
T43 62-247 Sentence denotes a Schematic representation of SARS, MERS and HKU1 coronavirus S glycoproteins, showing the positions of N-linked glycosylation amino-acid sequons (NXS/T, where X ≠ P) shown as branches.
T44 248-576 Sentence denotes The domains of the S glycoproteins are illustrated: N-terminal domain (NTD), receptor-binding domain (RBD), sub-domain 1/2 (SD1/2), fusion peptide (FP), heptad repeat 1/2 (HR1/2), central helix (CH), and transmembrane domain (TM). b HILIC-UPLC chromatograms of fluorescently labelled N-linked glycans from SARS, MERS and HKU1 S.
T45 577-787 Sentence denotes Oligomannose-type glycans (M5 to M9; Man5GlcNAc2–Man9GlcNAc2) (green) and complex-type glycans (magenta) were identified by Endo H digestion, with quantification of major glycan types summarised as a pie chart.
T46 788-917 Sentence denotes Oligomannose-type glycans are schematically annotated with mannose residues as green circles and GlcNAc residues as blue squares.

LitCovid-sample-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 436-441 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T28 33-37 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T29 92-96 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T30 554-558 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
206 33-37 Disease denotes SARS MESH:D045169
207 39-43 Disease denotes MERS MESH:D018352
205 53-60 Chemical denotes glycans MESH:D011134
234 92-96 Disease denotes SARS MESH:D045169
235 98-102 Disease denotes MERS MESH:D018352
223 112-123 Species denotes coronavirus Tax:11118
224 532-548 Chemical denotes N-linked glycans
236 554-558 Disease denotes SARS MESH:D045169
237 560-564 Disease denotes MERS MESH:D018352
225 577-589 Chemical denotes Oligomannose
226 595-602 Chemical denotes glycans MESH:D011134
227 614-637 Chemical denotes Man5GlcNAc2–Man9GlcNAc2
228 664-671 Chemical denotes glycans MESH:D011134
229 748-754 Chemical denotes glycan MESH:D011134
230 788-800 Chemical denotes Oligomannose
231 806-813 Chemical denotes glycans MESH:D011134
232 847-854 Chemical denotes mannose MESH:D008358
233 885-891 Chemical denotes GlcNAc MESH:D000117

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2374 124-139 Protein denotes S glycoproteins https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P30019|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94
T2473 267-282 Protein denotes S glycoproteins https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P30019|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94
T2572 350-353 Protein denotes RBD https://www.uniprot.org/uniprot/Q63492|https://www.uniprot.org/uniprot/Q63491|https://www.uniprot.org/uniprot/Q62815|https://www.uniprot.org/uniprot/Q62691|https://www.uniprot.org/uniprot/Q01542|https://www.uniprot.org/uniprot/P27732|https://www.uniprot.org/uniprot/O09024|https://www.uniprot.org/uniprot/O09023|https://www.uniprot.org/uniprot/O09022

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T24 175-188 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T25 708-717 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T21 175-188 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T22 708-717 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T23 166-188 http://purl.obolibrary.org/obo/GO_0006487 denotes N-linked glycosylation
T24 175-188 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T25 708-717 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T42 0-61 Sentence denotes Fig. 1 Compositional analysis of SARS, MERS and HKU1 glycans.
T43 62-247 Sentence denotes a Schematic representation of SARS, MERS and HKU1 coronavirus S glycoproteins, showing the positions of N-linked glycosylation amino-acid sequons (NXS/T, where X ≠ P) shown as branches.
T44 248-576 Sentence denotes The domains of the S glycoproteins are illustrated: N-terminal domain (NTD), receptor-binding domain (RBD), sub-domain 1/2 (SD1/2), fusion peptide (FP), heptad repeat 1/2 (HR1/2), central helix (CH), and transmembrane domain (TM). b HILIC-UPLC chromatograms of fluorescently labelled N-linked glycans from SARS, MERS and HKU1 S.
T45 577-787 Sentence denotes Oligomannose-type glycans (M5 to M9; Man5GlcNAc2–Man9GlcNAc2) (green) and complex-type glycans (magenta) were identified by Endo H digestion, with quantification of major glycan types summarised as a pie chart.
T46 788-917 Sentence denotes Oligomannose-type glycans are schematically annotated with mannose residues as green circles and GlcNAc residues as blue squares.

LitCovid-sample-Glycan

Id Subject Object Predicate Lexical cue
T1 847-854 http://rdf.glyconavi.org/CarTNa/CarTNa218/trivialname denotes mannose
T2 885-891 https://glytoucan.org/Structures/Glycans/G26693XF denotes GlcNAc
T3 885-891 https://glytoucan.org/Structures/Glycans/G01864SU denotes GlcNAc
T4 885-891 https://glytoucan.org/Structures/Glycans/G85391SA denotes GlcNAc
T5 885-891 https://glytoucan.org/Structures/Glycans/G41950LU denotes GlcNAc
T6 885-891 https://glytoucan.org/Structures/Glycans/G57195RJ denotes GlcNAc
T7 885-891 https://glytoucan.org/Structures/Glycans/G17605FD denotes GlcNAc
T8 885-891 https://glytoucan.org/Structures/Glycans/G54644LT denotes GlcNAc
T9 885-891 https://glytoucan.org/Structures/Glycans/G89565QL denotes GlcNAc
T10 885-891 https://glytoucan.org/Structures/Glycans/G55978NL denotes GlcNAc
T11 885-891 https://glytoucan.org/Structures/Glycans/G25126RB denotes GlcNAc
T12 885-891 https://glytoucan.org/Structures/Glycans/G25694UG denotes GlcNAc
T13 885-891 https://glytoucan.org/Structures/Glycans/G80869MR denotes GlcNAc
T14 885-891 https://glytoucan.org/Structures/Glycans/G51848AD denotes GlcNAc
T15 885-891 https://glytoucan.org/Structures/Glycans/G94667GM denotes GlcNAc
T16 885-891 https://glytoucan.org/Structures/Glycans/G30124BO denotes GlcNAc
T17 885-891 https://glytoucan.org/Structures/Glycans/G82777EZ denotes GlcNAc
T18 885-891 https://glytoucan.org/Structures/Glycans/G10151YZ denotes GlcNAc
T19 885-891 https://glytoucan.org/Structures/Glycans/G17585ZM denotes GlcNAc
T20 885-891 https://glytoucan.org/Structures/Glycans/G38254HJ denotes GlcNAc
T21 885-891 https://glytoucan.org/Structures/Glycans/G04411CJ denotes GlcNAc
T22 885-891 https://glytoucan.org/Structures/Glycans/G70374VG denotes GlcNAc
T23 885-891 https://glytoucan.org/Structures/Glycans/G30874VW denotes GlcNAc
T24 885-891 https://glytoucan.org/Structures/Glycans/G45176LJ denotes GlcNAc
T25 885-891 https://glytoucan.org/Structures/Glycans/G75188FS denotes GlcNAc
T26 885-891 https://glytoucan.org/Structures/Glycans/G69333MI denotes GlcNAc
T27 885-891 https://glytoucan.org/Structures/Glycans/G10676XO denotes GlcNAc
T28 885-891 https://glytoucan.org/Structures/Glycans/G14843DJ denotes GlcNAc
T29 885-891 https://glytoucan.org/Structures/Glycans/G47546FR denotes GlcNAc
T30 885-891 https://glytoucan.org/Structures/Glycans/G73695ZM denotes GlcNAc
T31 885-891 https://glytoucan.org/Structures/Glycans/G40745NH denotes GlcNAc
T32 885-891 https://glytoucan.org/Structures/Glycans/G31923TJ denotes GlcNAc
T33 885-891 https://glytoucan.org/Structures/Glycans/G60519EP denotes GlcNAc
T34 885-891 https://glytoucan.org/Structures/Glycans/G07933IA denotes GlcNAc
T35 885-891 https://glytoucan.org/Structures/Glycans/G54496YV denotes GlcNAc
T36 885-891 https://glytoucan.org/Structures/Glycans/G70070AY denotes GlcNAc
T37 885-891 https://glytoucan.org/Structures/Glycans/G62953SQ denotes GlcNAc
T38 885-891 https://glytoucan.org/Structures/Glycans/G25238AV denotes GlcNAc
T39 885-891 https://glytoucan.org/Structures/Glycans/G40510DP denotes GlcNAc
T40 885-891 https://glytoucan.org/Structures/Glycans/G61120TK denotes GlcNAc
T41 885-891 https://glytoucan.org/Structures/Glycans/G81830JX denotes GlcNAc
T42 885-891 https://glytoucan.org/Structures/Glycans/G01591HR denotes GlcNAc
T43 885-891 https://glytoucan.org/Structures/Glycans/G90703NA denotes GlcNAc
T44 885-891 https://glytoucan.org/Structures/Glycans/G56520XN denotes GlcNAc
T45 885-891 https://glytoucan.org/Structures/Glycans/G41342KV denotes GlcNAc