PMC:7253482 / 7180-7502
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
273 | 129-140 | Species | denotes | coronavirus | Tax:11118 |
274 | 266-277 | Species | denotes | recombinant | Tax:575864 |
290 | 41-48 | Chemical | denotes | glycans | MESH:D011134 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T46 | 168-183 | Body_part | denotes | Golgi apparatus | http://purl.org/sig/ont/fma/fma63843 |
T47 | 236-248 | Body_part | denotes | cell surface | http://purl.org/sig/ont/fma/fma67653 |
T48 | 236-240 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T49 | 308-321 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T40 | 220-222 | http://purl.obolibrary.org/obo/CLO_0037161 | denotes | en |
T41 | 236-240 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T62 | 41-48 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
T63 | 220-222 | Chemical | denotes | en | http://purl.obolibrary.org/obo/CHEBI_30347 |
T64 | 308-321 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T23 | 141-148 | http://purl.obolibrary.org/obo/IDO_0000508 | denotes | virions |
T24 | 190-196 | http://purl.obolibrary.org/obo/IDO_0000508 | denotes | virion |
T25 | 236-240 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1086 | 0-12 | NNS | denotes | Observations |
T1087 | 13-15 | IN | denotes | of |
T1088 | 16-23 | NN | denotes | hybrid- |
T1089 | 24-27 | CC | denotes | and |
T1090 | 28-40 | JJ | denotes | complex-type |
T1091 | 41-48 | NNS | denotes | glycans |
T1092 | 49-51 | IN | denotes | on |
T1093 | 52-59 | RB | denotes | virally |
T1094 | 60-67 | VBN | denotes | derived |
T1095 | 68-81 | NN | denotes | material17,42 |
T1096 | 82-87 | MD | denotes | would |
T1097 | 87-88 | -COMMA- | denotes | , |
T1098 | 89-96 | RB | denotes | however |
T1099 | 96-97 | -COMMA- | denotes | , |
T1100 | 98-105 | VBP | denotes | suggest |
T1101 | 106-110 | IN | denotes | that |
T1102 | 111-113 | PRP | denotes | it |
T1103 | 114-116 | VBZ | denotes | is |
T1104 | 117-123 | JJ | denotes | likely |
T1105 | 124-128 | IN | denotes | that |
T1106 | 129-140 | NN | denotes | coronavirus |
T1107 | 141-148 | NNS | denotes | virions |
T1108 | 149-155 | VBP | denotes | travel |
T1109 | 156-163 | IN | denotes | through |
T1110 | 164-167 | DT | denotes | the |
T1111 | 168-173 | NNP | denotes | Golgi |
T1112 | 174-183 | NN | denotes | apparatus |
T1113 | 184-189 | IN | denotes | after |
T1114 | 190-196 | NN | denotes | virion |
T1115 | 197-206 | NN | denotes | formation |
T1116 | 207-209 | IN | denotes | in |
T1117 | 210-213 | DT | denotes | the |
T1118 | 214-219 | NN | denotes | ERGIC |
T1119 | 220-222 | IN | denotes | en |
T1120 | 223-228 | NN | denotes | route |
T1121 | 229-231 | TO | denotes | to |
T1122 | 232-235 | DT | denotes | the |
T1123 | 236-240 | NN | denotes | cell |
T1124 | 241-248 | NN | denotes | surface |
T1125 | 248-249 | -COMMA- | denotes | , |
T1126 | 250-254 | RB | denotes | thus |
T1127 | 255-265 | VBG | denotes | supporting |
T1128 | 266-277 | JJ | denotes | recombinant |
T1129 | 278-288 | NNS | denotes | immunogens |
T1130 | 289-291 | IN | denotes | as |
T1131 | 292-298 | NNS | denotes | models |
T1132 | 299-301 | IN | denotes | of |
T1133 | 302-307 | JJ | denotes | viral |
T1134 | 308-321 | NNS | denotes | glycoproteins |
R1096 | T1086 | T1087 | arg1Of | Observations,of |
R1097 | T1089 | T1087 | arg2Of | and,of |
R1098 | T1088 | T1089 | arg1Of | hybrid-,and |
R1099 | T1091 | T1089 | arg2Of | glycans,and |
R1100 | T1091 | T1090 | arg1Of | glycans,complex-type |
R1101 | T1089 | T1092 | arg1Of | and,on |
R1102 | T1095 | T1092 | arg2Of | "material17,42",on |
R1103 | T1094 | T1093 | arg1Of | derived,virally |
R1104 | T1095 | T1094 | arg1Of | "material17,42",derived |
R1105 | T1086 | T1096 | arg1Of | Observations,would |
R1106 | T1100 | T1099 | arg2Of | suggest,"," |
R1107 | T1086 | T1100 | arg1Of | Observations,suggest |
R1108 | T1103 | T1100 | arg2Of | is,suggest |
R1109 | T1103 | T1101 | arg1Of | is,that |
R1110 | T1102 | T1103 | arg1Of | it,is |
R1111 | T1104 | T1103 | arg2Of | likely,is |
R1112 | T1102 | T1104 | arg1Of | it,likely |
R1113 | T1108 | T1104 | arg2Of | travel,likely |
R1114 | T1108 | T1105 | arg1Of | travel,that |
R1115 | T1107 | T1106 | arg1Of | virions,coronavirus |
R1116 | T1107 | T1108 | arg1Of | virions,travel |
R1117 | T1108 | T1109 | arg1Of | travel,through |
R1118 | T1112 | T1109 | arg2Of | apparatus,through |
R1119 | T1112 | T1110 | arg1Of | apparatus,the |
R1120 | T1112 | T1111 | arg1Of | apparatus,Golgi |
R1121 | T1112 | T1113 | arg1Of | apparatus,after |
R1122 | T1115 | T1113 | arg2Of | formation,after |
R1123 | T1115 | T1114 | arg1Of | formation,virion |
R1124 | T1115 | T1116 | arg1Of | formation,in |
R1125 | T1118 | T1116 | arg2Of | ERGIC,in |
R1126 | T1118 | T1117 | arg1Of | ERGIC,the |
R1127 | T1118 | T1119 | arg1Of | ERGIC,en |
R1128 | T1120 | T1119 | arg2Of | route,en |
R1129 | T1118 | T1121 | arg1Of | ERGIC,to |
R1130 | T1124 | T1121 | arg2Of | surface,to |
R1131 | T1124 | T1122 | arg1Of | surface,the |
R1132 | T1124 | T1123 | arg1Of | surface,cell |
R1133 | T1103 | T1125 | arg1Of | is,"," |
R1134 | T1127 | T1126 | arg1Of | supporting,thus |
R1135 | T1102 | T1127 | arg1Of | it,supporting |
R1136 | T1129 | T1127 | arg2Of | immunogens,supporting |
R1137 | T1103 | T1127 | modOf | is,supporting |
R1138 | T1129 | T1128 | arg1Of | immunogens,recombinant |
R1139 | T1127 | T1130 | arg1Of | supporting,as |
R1140 | T1131 | T1130 | arg2Of | models,as |
R1141 | T1131 | T1132 | arg1Of | models,of |
R1142 | T1134 | T1132 | arg2Of | glycoproteins,of |
R1143 | T1134 | T1133 | arg1Of | glycoproteins,viral |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T46 | 168-183 | Body_part | denotes | Golgi apparatus | http://purl.org/sig/ont/fma/fma63843 |
T47 | 236-248 | Body_part | denotes | cell surface | http://purl.org/sig/ont/fma/fma67653 |
T48 | 236-240 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T49 | 308-321 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T54 | 41-48 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
T55 | 308-321 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T41 | 0-322 | Sentence | denotes | Observations of hybrid- and complex-type glycans on virally derived material17,42 would, however, suggest that it is likely that coronavirus virions travel through the Golgi apparatus after virion formation in the ERGIC en route to the cell surface, thus supporting recombinant immunogens as models of viral glycoproteins. |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
290 | 41-48 | Chemical | denotes | glycans | MESH:D011134 |
273 | 129-140 | Species | denotes | coronavirus | Tax:11118 |
274 | 266-277 | Species | denotes | recombinant | Tax:575864 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T2289 | 308-321 | Protein | denotes | glycoproteins | https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8 |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T23 | 197-206 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20 | 197-206 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22 | 197-206 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T41 | 0-322 | Sentence | denotes | Observations of hybrid- and complex-type glycans on virally derived material17,42 would, however, suggest that it is likely that coronavirus virions travel through the Golgi apparatus after virion formation in the ERGIC en route to the cell surface, thus supporting recombinant immunogens as models of viral glycoproteins. |