PMC:7253482 / 416-767 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"24","span":{"begin":92,"end":97},"obj":"Gene"},{"id":"28","span":{"begin":267,"end":271},"obj":"Species"},{"id":"29","span":{"begin":329,"end":340},"obj":"Species"},{"id":"34","span":{"begin":139,"end":145},"obj":"Chemical"},{"id":"35","span":{"begin":197,"end":209},"obj":"Chemical"},{"id":"36","span":{"begin":215,"end":221},"obj":"Chemical"},{"id":"37","span":{"begin":311,"end":317},"obj":"Chemical"},{"id":"42","span":{"begin":157,"end":161},"obj":"Disease"},{"id":"43","span":{"begin":253,"end":257},"obj":"Disease"}],"attributes":[{"id":"A24","pred":"tao:has_database_id","subj":"24","obj":"Gene:43740568"},{"id":"A28","pred":"tao:has_database_id","subj":"28","obj":"Tax:11118"},{"id":"A29","pred":"tao:has_database_id","subj":"29","obj":"Tax:11118"},{"id":"A34","pred":"tao:has_database_id","subj":"34","obj":"MESH:D011134"},{"id":"A36","pred":"tao:has_database_id","subj":"36","obj":"MESH:D011134"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"MESH:D011134"},{"id":"A42","pred":"tao:has_database_id","subj":"42","obj":"MESH:D018352"},{"id":"A43","pred":"tao:has_database_id","subj":"43","obj":"MESH:D045169"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-PD-MONDO

    {"project":"LitCovid-PD-MONDO","denotations":[{"id":"T3","span":{"begin":253,"end":257},"obj":"Disease"}],"attributes":[{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T2","span":{"begin":115,"end":116},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T3","span":{"begin":284,"end":285},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-sample-PD-IDO

    {"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T4","span":{"begin":73,"end":78},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T62","span":{"begin":2,"end":13},"obj":"RB"},{"id":"T63","span":{"begin":14,"end":26},"obj":"VBN"},{"id":"T64","span":{"begin":26,"end":27},"obj":"-COMMA-"},{"id":"T65","span":{"begin":28,"end":36},"obj":"VBG"},{"id":"T66","span":{"begin":37,"end":43},"obj":"IN"},{"id":"T67","span":{"begin":44,"end":49},"obj":"CD"},{"id":"T68","span":{"begin":50,"end":58},"obj":"JJ"},{"id":"T69","span":{"begin":59,"end":72},"obj":"NN"},{"id":"T70","span":{"begin":73,"end":78},"obj":"NNS"},{"id":"T71","span":{"begin":79,"end":82},"obj":"IN"},{"id":"T72","span":{"begin":83,"end":91},"obj":"JJ"},{"id":"T73","span":{"begin":92,"end":97},"obj":"NN"},{"id":"T74","span":{"begin":99,"end":103},"obj":"RB"},{"id":"T75","span":{"begin":103,"end":104},"obj":"-COMMA-"},{"id":"T76","span":{"begin":105,"end":107},"obj":"PRP"},{"id":"T77","span":{"begin":108,"end":114},"obj":"VBP"},{"id":"T78","span":{"begin":115,"end":116},"obj":"DT"},{"id":"T79","span":{"begin":117,"end":125},"obj":"JJ"},{"id":"T80","span":{"begin":126,"end":130},"obj":"NN"},{"id":"T81","span":{"begin":131,"end":133},"obj":"IN"},{"id":"T82","span":{"begin":134,"end":138},"obj":"JJ"},{"id":"T83","span":{"begin":139,"end":145},"obj":"NN"},{"id":"T84","span":{"begin":146,"end":153},"obj":"NN"},{"id":"T85","span":{"begin":154,"end":156},"obj":"IN"},{"id":"T86","span":{"begin":157,"end":161},"obj":"NNP"},{"id":"T87","span":{"begin":162,"end":163},"obj":"NNP"},{"id":"T88","span":{"begin":164,"end":168},"obj":"WDT"},{"id":"T89","span":{"begin":169,"end":176},"obj":"VBZ"},{"id":"T90","span":{"begin":177,"end":179},"obj":"IN"},{"id":"T91","span":{"begin":180,"end":183},"obj":"DT"},{"id":"T92","span":{"begin":184,"end":193},"obj":"NN"},{"id":"T93","span":{"begin":194,"end":196},"obj":"IN"},{"id":"T94","span":{"begin":197,"end":214},"obj":"JJ"},{"id":"T95","span":{"begin":215,"end":221},"obj":"NN"},{"id":"T96","span":{"begin":222,"end":230},"obj":"NNS"},{"id":"T97","span":{"begin":230,"end":231},"obj":"-COMMA-"},{"id":"T98","span":{"begin":232,"end":237},"obj":"WDT"},{"id":"T99","span":{"begin":238,"end":242},"obj":"VBD"},{"id":"T100","span":{"begin":243,"end":249},"obj":"JJ"},{"id":"T101","span":{"begin":250,"end":252},"obj":"IN"},{"id":"T102","span":{"begin":253,"end":257},"obj":"NNS"},{"id":"T103","span":{"begin":258,"end":261},"obj":"CC"},{"id":"T104","span":{"begin":262,"end":266},"obj":"NN"},{"id":"T105","span":{"begin":267,"end":271},"obj":"NNS"},{"id":"T106","span":{"begin":273,"end":275},"obj":"PRP"},{"id":"T107","span":{"begin":276,"end":283},"obj":"VBP"},{"id":"T108","span":{"begin":284,"end":285},"obj":"DT"},{"id":"T109","span":{"begin":286,"end":296},"obj":"NN"},{"id":"T110","span":{"begin":297,"end":299},"obj":"IN"},{"id":"T111","span":{"begin":300,"end":303},"obj":"DT"},{"id":"T112","span":{"begin":304,"end":310},"obj":"JJ"},{"id":"T113","span":{"begin":311,"end":317},"obj":"NN"},{"id":"T114","span":{"begin":318,"end":325},"obj":"NN"},{"id":"T115","span":{"begin":326,"end":328},"obj":"IN"},{"id":"T116","span":{"begin":329,"end":340},"obj":"NN"},{"id":"T117","span":{"begin":341,"end":347},"obj":"NNS"}],"relations":[{"id":"R58","pred":"arg1Of","subj":"T63","obj":"T62"},{"id":"R60","pred":"arg1Of","subj":"T63","obj":"T64"},{"id":"R62","pred":"arg2Of","subj":"T70","obj":"T65"},{"id":"R63","pred":"modOf","subj":"T63","obj":"T65"},{"id":"R64","pred":"arg1Of","subj":"T70","obj":"T66"},{"id":"R65","pred":"arg1Of","subj":"T70","obj":"T67"},{"id":"R66","pred":"arg1Of","subj":"T70","obj":"T68"},{"id":"R67","pred":"arg1Of","subj":"T70","obj":"T69"},{"id":"R68","pred":"arg1Of","subj":"T70","obj":"T71"},{"id":"R69","pred":"arg2Of","subj":"T73","obj":"T71"},{"id":"R70","pred":"arg1Of","subj":"T73","obj":"T72"},{"id":"R71","pred":"arg1Of","subj":"T77","obj":"T74"},{"id":"R72","pred":"arg1Of","subj":"T77","obj":"T75"},{"id":"R73","pred":"arg1Of","subj":"T76","obj":"T77"},{"id":"R74","pred":"arg2Of","subj":"T80","obj":"T77"},{"id":"R75","pred":"arg1Of","subj":"T80","obj":"T78"},{"id":"R76","pred":"arg1Of","subj":"T80","obj":"T79"},{"id":"R77","pred":"arg1Of","subj":"T80","obj":"T81"},{"id":"R78","pred":"arg2Of","subj":"T84","obj":"T81"},{"id":"R79","pred":"arg1Of","subj":"T84","obj":"T82"},{"id":"R80","pred":"arg1Of","subj":"T84","obj":"T83"},{"id":"R81","pred":"arg1Of","subj":"T80","obj":"T85"},{"id":"R82","pred":"arg2Of","subj":"T87","obj":"T85"},{"id":"R83","pred":"arg1Of","subj":"T87","obj":"T86"},{"id":"R84","pred":"arg1Of","subj":"T80","obj":"T88"},{"id":"R85","pred":"arg1Of","subj":"T80","obj":"T89"},{"id":"R86","pred":"arg1Of","subj":"T89","obj":"T90"},{"id":"R87","pred":"arg2Of","subj":"T92","obj":"T90"},{"id":"R88","pred":"arg1Of","subj":"T92","obj":"T91"},{"id":"R89","pred":"arg1Of","subj":"T92","obj":"T93"},{"id":"R90","pred":"arg2Of","subj":"T96","obj":"T93"},{"id":"R91","pred":"arg1Of","subj":"T96","obj":"T94"},{"id":"R92","pred":"arg1Of","subj":"T96","obj":"T95"},{"id":"R93","pred":"arg1Of","subj":"T96","obj":"T97"},{"id":"R94","pred":"arg1Of","subj":"T96","obj":"T98"},{"id":"R95","pred":"arg1Of","subj":"T96","obj":"T99"},{"id":"R96","pred":"arg2Of","subj":"T100","obj":"T99"},{"id":"R97","pred":"arg1Of","subj":"T96","obj":"T100"},{"id":"R98","pred":"arg1Of","subj":"T100","obj":"T101"},{"id":"R99","pred":"arg2Of","subj":"T103","obj":"T101"},{"id":"R100","pred":"arg1Of","subj":"T102","obj":"T103"},{"id":"R101","pred":"arg2Of","subj":"T105","obj":"T103"},{"id":"R102","pred":"arg1Of","subj":"T105","obj":"T104"},{"id":"R103","pred":"arg1Of","subj":"T106","obj":"T107"},{"id":"R104","pred":"arg2Of","subj":"T109","obj":"T107"},{"id":"R105","pred":"arg1Of","subj":"T109","obj":"T108"},{"id":"R106","pred":"arg1Of","subj":"T109","obj":"T110"},{"id":"R107","pred":"arg2Of","subj":"T114","obj":"T110"},{"id":"R108","pred":"arg1Of","subj":"T114","obj":"T111"},{"id":"R109","pred":"arg1Of","subj":"T114","obj":"T112"},{"id":"R110","pred":"arg1Of","subj":"T114","obj":"T113"},{"id":"R111","pred":"arg1Of","subj":"T114","obj":"T115"},{"id":"R112","pred":"arg2Of","subj":"T117","obj":"T115"},{"id":"R113","pred":"arg1Of","subj":"T117","obj":"T116"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-sample-PD-NCBITaxon

    {"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T4","span":{"begin":157,"end":161},"obj":"Species"},{"id":"T5","span":{"begin":253,"end":257},"obj":"Species"},{"id":"T6","span":{"begin":262,"end":271},"obj":"Species"}],"attributes":[{"id":"A4","pred":"ncbi_taxonomy_id","subj":"T4","obj":"NCBItxid:1335626"},{"id":"A5","pred":"ncbi_taxonomy_id","subj":"T5","obj":"NCBItxid:694009"},{"id":"A6","pred":"ncbi_taxonomy_id","subj":"T6","obj":"NCBItxid:290028"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-sample-sentences

    {"project":"LitCovid-sample-sentences","denotations":[{"id":"T6","span":{"begin":99,"end":272},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-sample-PD-MONDO

    {"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T3","span":{"begin":253,"end":257},"obj":"Disease"}],"attributes":[{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"24","span":{"begin":92,"end":97},"obj":"Gene"},{"id":"34","span":{"begin":139,"end":145},"obj":"Chemical"},{"id":"42","span":{"begin":157,"end":161},"obj":"Disease"},{"id":"35","span":{"begin":197,"end":209},"obj":"Chemical"},{"id":"36","span":{"begin":215,"end":221},"obj":"Chemical"},{"id":"43","span":{"begin":253,"end":257},"obj":"Disease"},{"id":"28","span":{"begin":267,"end":271},"obj":"Species"},{"id":"37","span":{"begin":311,"end":317},"obj":"Chemical"},{"id":"29","span":{"begin":329,"end":340},"obj":"Species"}],"attributes":[{"id":"A24","pred":"pubann:denotes","subj":"24","obj":"Gene:43740568"},{"id":"A34","pred":"pubann:denotes","subj":"34","obj":"MESH:D011134"},{"id":"A42","pred":"pubann:denotes","subj":"42","obj":"MESH:D018352"},{"id":"A36","pred":"pubann:denotes","subj":"36","obj":"MESH:D011134"},{"id":"A43","pred":"pubann:denotes","subj":"43","obj":"MESH:D045169"},{"id":"A28","pred":"pubann:denotes","subj":"28","obj":"Tax:11118"},{"id":"A37","pred":"pubann:denotes","subj":"37","obj":"MESH:D011134"},{"id":"A29","pred":"pubann:denotes","subj":"29","obj":"Tax:11118"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-sample-PD-GO-BP-0

    {"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T4","span":{"begin":59,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T5","span":{"begin":184,"end":193},"obj":"http://purl.obolibrary.org/obo/GO_0009058"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-sample-GO-BP

    {"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T4","span":{"begin":59,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T5","span":{"begin":184,"end":193},"obj":"http://purl.obolibrary.org/obo/GO_0009058"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-PD-GO-BP

    {"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T4","span":{"begin":50,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0006487"},{"id":"T5","span":{"begin":59,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T6","span":{"begin":184,"end":193},"obj":"http://purl.obolibrary.org/obo/GO_0009058"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T6","span":{"begin":99,"end":272},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"e extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. Here, we reveal a specific area of high glycan density on MERS S that results in the formation of oligomannose-type glycan clusters, which were absent on SARS and HKU1 CoVs. We provide a comparison of the global glycan density of coronavirus spikes wit"}