PMC:7253482 / 3292-3675 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"137","span":{"begin":27,"end":33},"obj":"Chemical"},{"id":"138","span":{"begin":87,"end":99},"obj":"Chemical"},{"id":"139","span":{"begin":105,"end":112},"obj":"Chemical"},{"id":"140","span":{"begin":183,"end":189},"obj":"Chemical"},{"id":"141","span":{"begin":222,"end":229},"obj":"Chemical"},{"id":"142","span":{"begin":367,"end":374},"obj":"Chemical"}],"attributes":[{"id":"A137","pred":"tao:has_database_id","subj":"137","obj":"MESH:D011134"},{"id":"A139","pred":"tao:has_database_id","subj":"139","obj":"MESH:D011134"},{"id":"A140","pred":"tao:has_database_id","subj":"140","obj":"MESH:D011134"},{"id":"A141","pred":"tao:has_database_id","subj":"141","obj":"MESH:D011134"},{"id":"A142","pred":"tao:has_database_id","subj":"142","obj":"MESH:D011134"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T23","span":{"begin":265,"end":277},"obj":"Body_part"}],"attributes":[{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma62925"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T24","span":{"begin":278,"end":281},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T25","span":{"begin":324,"end":325},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T26","span":{"begin":380,"end":382},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T22","span":{"begin":105,"end":112},"obj":"Chemical"},{"id":"T23","span":{"begin":265,"end":277},"obj":"Chemical"}],"attributes":[{"id":"A22","pred":"chebi_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A23","pred":"chebi_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-sample-PD-IDO

    {"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T18","span":{"begin":354,"end":358},"obj":"http://purl.obolibrary.org/obo/IDO_0000531"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T507","span":{"begin":0,"end":8},"obj":"JJ"},{"id":"T508","span":{"begin":9,"end":17},"obj":"NNS"},{"id":"T509","span":{"begin":18,"end":20},"obj":"IN"},{"id":"T510","span":{"begin":21,"end":26},"obj":"JJ"},{"id":"T511","span":{"begin":27,"end":33},"obj":"NN"},{"id":"T512","span":{"begin":34,"end":41},"obj":"NNS"},{"id":"T513","span":{"begin":42,"end":46},"obj":"VBP"},{"id":"T514","span":{"begin":47,"end":55},"obj":"VBN"},{"id":"T515","span":{"begin":56,"end":59},"obj":"DT"},{"id":"T516","span":{"begin":60,"end":68},"obj":"NN"},{"id":"T517","span":{"begin":69,"end":71},"obj":"IN"},{"id":"T518","span":{"begin":72,"end":86},"obj":"JJ"},{"id":"T519","span":{"begin":87,"end":104},"obj":"JJ"},{"id":"T520","span":{"begin":105,"end":112},"obj":"NNS"},{"id":"T521","span":{"begin":113,"end":117},"obj":"WDT"},{"id":"T522","span":{"begin":118,"end":127},"obj":"RB"},{"id":"T523","span":{"begin":128,"end":133},"obj":"VBP"},{"id":"T524","span":{"begin":134,"end":137},"obj":"JJ"},{"id":"T525","span":{"begin":138,"end":140},"obj":"TO"},{"id":"T526","span":{"begin":141,"end":147},"obj":"JJ"},{"id":"T527","span":{"begin":148,"end":159},"obj":"NNS"},{"id":"T528","span":{"begin":160,"end":164},"obj":"WDT"},{"id":"T529","span":{"begin":165,"end":172},"obj":"VBP"},{"id":"T530","span":{"begin":173,"end":179},"obj":"NN"},{"id":"T531","span":{"begin":180,"end":182},"obj":"IN"},{"id":"T532","span":{"begin":183,"end":189},"obj":"NN"},{"id":"T533","span":{"begin":190,"end":200},"obj":"NN"},{"id":"T534","span":{"begin":201,"end":208},"obj":"NNS"},{"id":"T535","span":{"begin":209,"end":211},"obj":"TO"},{"id":"T536","span":{"begin":212,"end":221},"obj":"NN"},{"id":"T537","span":{"begin":222,"end":237},"obj":"NN"},{"id":"T538","span":{"begin":237,"end":238},"obj":"-COMMA-"},{"id":"T539","span":{"begin":239,"end":249},"obj":"RB"},{"id":"T540","span":{"begin":250,"end":254},"obj":"WRB"},{"id":"T541","span":{"begin":255,"end":258},"obj":"DT"},{"id":"T542","span":{"begin":259,"end":264},"obj":"JJ"},{"id":"T543","span":{"begin":265,"end":277},"obj":"NN"},{"id":"T544","span":{"begin":278,"end":281},"obj":"VBZ"},{"id":"T545","span":{"begin":282,"end":289},"obj":"VBN"},{"id":"T546","span":{"begin":290,"end":292},"obj":"TO"},{"id":"T547","span":{"begin":293,"end":297},"obj":"VB"},{"id":"T548","span":{"begin":298,"end":309},"obj":"JJ"},{"id":"T549","span":{"begin":310,"end":318},"obj":"NNS"},{"id":"T550","span":{"begin":319,"end":323},"obj":"IN"},{"id":"T551","span":{"begin":324,"end":325},"obj":"DT"},{"id":"T552","span":{"begin":326,"end":338},"obj":"RB"},{"id":"T553","span":{"begin":339,"end":344},"obj":"JJ"},{"id":"T554","span":{"begin":345,"end":350},"obj":"NN"},{"id":"T555","span":{"begin":351,"end":353},"obj":"IN"},{"id":"T556","span":{"begin":354,"end":366},"obj":"JJ"},{"id":"T557","span":{"begin":367,"end":382},"obj":"NN"}],"relations":[{"id":"R506","pred":"arg1Of","subj":"T508","obj":"T507"},{"id":"R507","pred":"arg1Of","subj":"T508","obj":"T509"},{"id":"R508","pred":"arg2Of","subj":"T512","obj":"T509"},{"id":"R509","pred":"arg1Of","subj":"T512","obj":"T510"},{"id":"R510","pred":"arg1Of","subj":"T512","obj":"T511"},{"id":"R511","pred":"arg1Of","subj":"T508","obj":"T513"},{"id":"R512","pred":"arg2Of","subj":"T514","obj":"T513"},{"id":"R513","pred":"arg1Of","subj":"T508","obj":"T514"},{"id":"R514","pred":"arg2Of","subj":"T516","obj":"T514"},{"id":"R515","pred":"arg1Of","subj":"T516","obj":"T515"},{"id":"R516","pred":"arg1Of","subj":"T516","obj":"T517"},{"id":"R517","pred":"arg2Of","subj":"T520","obj":"T517"},{"id":"R518","pred":"arg1Of","subj":"T520","obj":"T518"},{"id":"R519","pred":"arg1Of","subj":"T520","obj":"T519"},{"id":"R520","pred":"arg1Of","subj":"T520","obj":"T521"},{"id":"R521","pred":"arg1Of","subj":"T523","obj":"T522"},{"id":"R522","pred":"arg1Of","subj":"T520","obj":"T523"},{"id":"R523","pred":"arg1Of","subj":"T525","obj":"T524"},{"id":"R524","pred":"arg1Of","subj":"T523","obj":"T525"},{"id":"R525","pred":"arg2Of","subj":"T527","obj":"T525"},{"id":"R526","pred":"arg1Of","subj":"T527","obj":"T526"},{"id":"R527","pred":"arg1Of","subj":"T527","obj":"T528"},{"id":"R528","pred":"arg1Of","subj":"T527","obj":"T529"},{"id":"R529","pred":"arg2Of","subj":"T530","obj":"T529"},{"id":"R530","pred":"arg1Of","subj":"T530","obj":"T531"},{"id":"R531","pred":"arg2Of","subj":"T534","obj":"T531"},{"id":"R532","pred":"arg1Of","subj":"T534","obj":"T532"},{"id":"R533","pred":"arg1Of","subj":"T534","obj":"T533"},{"id":"R534","pred":"arg1Of","subj":"T530","obj":"T535"},{"id":"R535","pred":"arg2Of","subj":"T537","obj":"T535"},{"id":"R536","pred":"arg1Of","subj":"T537","obj":"T536"},{"id":"R537","pred":"arg1Of","subj":"T523","obj":"T538"},{"id":"R538","pred":"arg1Of","subj":"T523","obj":"T539"},{"id":"R539","pred":"arg2Of","subj":"T545","obj":"T539"},{"id":"R540","pred":"arg1Of","subj":"T539","obj":"T540"},{"id":"R541","pred":"arg1Of","subj":"T543","obj":"T541"},{"id":"R542","pred":"arg1Of","subj":"T543","obj":"T542"},{"id":"R543","pred":"arg1Of","subj":"T543","obj":"T544"},{"id":"R544","pred":"arg2Of","subj":"T545","obj":"T544"},{"id":"R545","pred":"arg1Of","subj":"T543","obj":"T545"},{"id":"R546","pred":"arg2Of","subj":"T547","obj":"T545"},{"id":"R547","pred":"arg1Of","subj":"T547","obj":"T546"},{"id":"R548","pred":"arg1Of","subj":"T543","obj":"T547"},{"id":"R549","pred":"arg2Of","subj":"T549","obj":"T547"},{"id":"R550","pred":"arg1Of","subj":"T549","obj":"T548"},{"id":"R551","pred":"arg1Of","subj":"T547","obj":"T550"},{"id":"R552","pred":"arg2Of","subj":"T554","obj":"T550"},{"id":"R553","pred":"arg1Of","subj":"T554","obj":"T551"},{"id":"R554","pred":"arg1Of","subj":"T553","obj":"T552"},{"id":"R555","pred":"arg1Of","subj":"T554","obj":"T553"},{"id":"R556","pred":"arg1Of","subj":"T554","obj":"T555"},{"id":"R557","pred":"arg2Of","subj":"T557","obj":"T555"},{"id":"R558","pred":"arg1Of","subj":"T557","obj":"T556"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T23","span":{"begin":265,"end":277},"obj":"Body_part"}],"attributes":[{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma62925"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T20","span":{"begin":105,"end":112},"obj":"Chemical"},{"id":"T21","span":{"begin":265,"end":277},"obj":"Chemical"}],"attributes":[{"id":"A20","pred":"chebi_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A21","pred":"chebi_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-sample-sentences

    {"project":"LitCovid-sample-sentences","denotations":[{"id":"T21","span":{"begin":0,"end":383},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"137","span":{"begin":27,"end":33},"obj":"Chemical"},{"id":"138","span":{"begin":87,"end":99},"obj":"Chemical"},{"id":"139","span":{"begin":105,"end":112},"obj":"Chemical"},{"id":"140","span":{"begin":183,"end":189},"obj":"Chemical"},{"id":"141","span":{"begin":222,"end":229},"obj":"Chemical"},{"id":"142","span":{"begin":367,"end":374},"obj":"Chemical"}],"attributes":[{"id":"A137","pred":"pubann:denotes","subj":"137","obj":"MESH:D011134"},{"id":"A139","pred":"pubann:denotes","subj":"139","obj":"MESH:D011134"},{"id":"A140","pred":"pubann:denotes","subj":"140","obj":"MESH:D011134"},{"id":"A141","pred":"pubann:denotes","subj":"141","obj":"MESH:D011134"},{"id":"A142","pred":"pubann:denotes","subj":"142","obj":"MESH:D011134"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-sample-UniProt

    {"project":"LitCovid-sample-UniProt","denotations":[{"id":"T1548","span":{"begin":265,"end":277},"obj":"Protein"}],"attributes":[{"id":"A1548","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q9QSP1"},{"id":"A1549","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q9QJT6"},{"id":"A1550","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q9JGT4"},{"id":"A1551","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q9IPJ6"},{"id":"A1552","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q9DIC6"},{"id":"A1553","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q91DS0"},{"id":"A1554","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q91C28"},{"id":"A1555","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8QQA2"},{"id":"A1556","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8QPE5"},{"id":"A1557","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8QPE4"},{"id":"A1558","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8QPE3"},{"id":"A1559","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8JTH0"},{"id":"A1560","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8BDV6"},{"id":"A1561","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8B6J6"},{"id":"A1562","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8B0I1"},{"id":"A1563","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8B0H6"},{"id":"A1564","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q8B0H1"},{"id":"A1565","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q89669"},{"id":"A1566","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q85213"},{"id":"A1567","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q82706"},{"id":"A1568","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q82683"},{"id":"A1569","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q82020"},{"id":"A1570","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q787B5"},{"id":"A1571","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q77SK0"},{"id":"A1572","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q77N36"},{"id":"A1573","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q76G52"},{"id":"A1574","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q75T09"},{"id":"A1575","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q6X1D5"},{"id":"A1576","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q6X1D1"},{"id":"A1577","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q6TYA0"},{"id":"A1578","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q6E0W7"},{"id":"A1579","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q66T62"},{"id":"A1580","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5VKP3"},{"id":"A1581","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5VKN9"},{"id":"A1582","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5K2K4"},{"id":"A1583","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5IX93"},{"id":"A1584","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5IX92"},{"id":"A1585","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5IX91"},{"id":"A1586","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5IX90"},{"id":"A1587","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5IX89"},{"id":"A1588","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5IX88"},{"id":"A1589","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5IX87"},{"id":"A1590","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q5GA86"},{"id":"A1591","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q58FH1"},{"id":"A1592","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q4VKV3"},{"id":"A1593","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q4F900"},{"id":"A1594","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q49LL3"},{"id":"A1595","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q49IU2"},{"id":"A1596","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q49IU1"},{"id":"A1597","pred":"uniprot_id","subj":"T1548","obj":"https://www.uniprot.org/uniprot/Q49IT9"},{"id":"A1598","pred":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analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T21","span":{"begin":0,"end":383},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34."}