PMC:7253482 / 26615-26834
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 848 | 132-139 | Chemical | denotes | glycans | MESH:D011134 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T147 | 25-35 | Body_part | denotes | amino-acid | http://purl.org/sig/ont/fma/fma82739 |
| T148 | 69-77 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
| T149 | 206-218 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T164 | 145-146 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T253 | 25-30 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T254 | 31-35 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T255 | 132-139 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T256 | 206-218 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
LitCovid-sample-Enju
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1425 | 0-2 | PRP | denotes | We |
| T1426 | 3-7 | RB | denotes | also |
| T1427 | 8-19 | VBP | denotes | demonstrate |
| T1428 | 20-24 | IN | denotes | that |
| T1429 | 25-35 | JJ | denotes | amino-acid |
| T1430 | 36-51 | NN | denotes | diversification |
| T1431 | 52-58 | RB | denotes | indeed |
| T1432 | 59-65 | VBZ | denotes | occurs |
| T1433 | 66-68 | IN | denotes | at |
| T1434 | 69-77 | NN | denotes | antibody |
| T1435 | 78-88 | JJ | denotes | accessible |
| T1436 | 89-96 | NNS | denotes | regions |
| T1437 | 97-99 | IN | denotes | on |
| T1438 | 100-103 | DT | denotes | the |
| T1439 | 104-110 | NN | denotes | trimer |
| T1440 | 110-111 | -COMMA- | denotes | , |
| T1441 | 112-117 | WDT | denotes | which |
| T1442 | 118-126 | VBZ | denotes | confirms |
| T1443 | 127-131 | IN | denotes | that |
| T1444 | 132-139 | NNS | denotes | glycans |
| T1445 | 140-144 | VBP | denotes | play |
| T1446 | 145-146 | DT | denotes | a |
| T1447 | 147-151 | NN | denotes | role |
| T1448 | 152-154 | IN | denotes | in |
| T1449 | 155-164 | VBG | denotes | occluding |
| T1450 | 165-173 | JJ | denotes | specific |
| T1451 | 174-181 | NNS | denotes | regions |
| T1452 | 182-184 | IN | denotes | if |
| T1453 | 185-198 | NN | denotes | vulnerability |
| T1454 | 199-201 | IN | denotes | on |
| T1455 | 202-205 | DT | denotes | the |
| T1456 | 206-218 | NN | denotes | glycoprotein |
| R1463 | T1427 | T1426 | arg1Of | demonstrate,also |
| R1464 | T1425 | T1427 | arg1Of | We,demonstrate |
| R1465 | T1432 | T1427 | arg2Of | occurs,demonstrate |
| R1466 | T1432 | T1428 | arg1Of | occurs,that |
| R1467 | T1430 | T1429 | arg1Of | diversification,amino-acid |
| R1468 | T1432 | T1431 | arg1Of | occurs,indeed |
| R1469 | T1430 | T1432 | arg1Of | diversification,occurs |
| R1470 | T1432 | T1433 | arg1Of | occurs,at |
| R1471 | T1436 | T1433 | arg2Of | regions,at |
| R1472 | T1436 | T1434 | arg1Of | regions,antibody |
| R84867 | T1436 | T1435 | arg1Of | regions,accessible |
| R1474 | T1436 | T1437 | arg1Of | regions,on |
| R1475 | T1439 | T1437 | arg2Of | trimer,on |
| R1476 | T1439 | T1438 | arg1Of | trimer,the |
| R1477 | T1439 | T1440 | arg1Of | trimer,"," |
| R1478 | T1439 | T1441 | arg1Of | trimer,which |
| R1479 | T1439 | T1442 | arg1Of | trimer,confirms |
| R1480 | T1445 | T1442 | arg2Of | play,confirms |
| R1481 | T1445 | T1443 | arg1Of | play,that |
| R1482 | T1444 | T1445 | arg1Of | glycans,play |
| R1483 | T1447 | T1445 | arg2Of | role,play |
| R1484 | T1447 | T1446 | arg1Of | role,a |
| R1485 | T1445 | T1448 | arg1Of | play,in |
| R1486 | T1449 | T1448 | arg2Of | occluding,in |
| R1487 | T1451 | T1449 | arg2Of | regions,occluding |
| R1488 | T1451 | T1450 | arg1Of | regions,specific |
| R1489 | T1451 | T1452 | arg1Of | regions,if |
| R1490 | T1453 | T1452 | arg2Of | vulnerability,if |
| R1491 | T1453 | T1454 | arg1Of | vulnerability,on |
| R1492 | T1456 | T1454 | arg2Of | glycoprotein,on |
| R1493 | T1456 | T1455 | arg1Of | glycoprotein,the |
LitCovid-sample-PD-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T146 | 25-35 | Body_part | denotes | amino-acid | http://purl.org/sig/ont/fma/fma82739 |
| T147 | 69-77 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
| T148 | 206-218 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T171 | 25-30 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T172 | 132-139 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T173 | 206-218 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T148 | 0-219 | Sentence | denotes | We also demonstrate that amino-acid diversification indeed occurs at antibody accessible regions on the trimer, which confirms that glycans play a role in occluding specific regions if vulnerability on the glycoprotein. |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 848 | 132-139 | Chemical | denotes | glycans | MESH:D011134 |
LitCovid-sample-UniProt
| Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
|---|---|---|---|---|---|
| T5162 | 206-218 | Protein | denotes | glycoprotein | https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T148 | 0-219 | Sentence | denotes | We also demonstrate that amino-acid diversification indeed occurs at antibody accessible regions on the trimer, which confirms that glycans play a role in occluding specific regions if vulnerability on the glycoprotein. |