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PMC:7253482 / 26259-26614 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
844 110-118 Species denotes MERS CoV Tax:1335626
845 68-83 Chemical denotes N-linked glycan
846 186-192 Chemical denotes glycan MESH:D011134
847 284-296 Chemical denotes oligomannose
851 101-105 Disease denotes SARS MESH:D045169

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T145 121-129 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T146 341-354 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T93 101-105 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T163 218-225 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T251 121-129 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T252 341-354 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T83 218-225 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1371 0-7 RB denotes Overall
T1372 7-8 -COMMA- denotes ,
T1373 9-13 DT denotes this
T1374 14-19 NN denotes study
T1375 20-24 VBZ denotes adds
T1376 25-32 JJ denotes further
T1377 33-41 NN denotes evidence
T1378 42-52 VBG denotes suggesting
T1379 53-57 IN denotes that
T1380 58-67 JJ denotes extensive
T1381 68-76 JJ denotes N-linked
T1382 77-83 NN denotes glycan
T1383 84-97 NNS denotes modifications
T1384 98-100 IN denotes of
T47921 101-105 NNP denotes SARS
T1386 106-109 CC denotes and
T1387 110-114 NNP denotes MERS
T1388 115-118 NN denotes CoV
T1389 119-120 NN denotes S
T1390 121-129 NNS denotes proteins
T1391 130-132 VBP denotes do
T1392 133-136 RB denotes not
T1393 137-147 VB denotes constitute
T1394 148-150 DT denotes an
T1395 151-160 JJ denotes effective
T1396 161-167 NN denotes shield
T1397 167-168 -COMMA- denotes ,
T1398 169-171 IN denotes in
T1399 172-182 NN denotes comparison
T1400 183-185 TO denotes to
T1401 186-192 NN denotes glycan
T1402 193-200 NNS denotes shields
T1403 201-203 IN denotes of
T1404 204-211 JJ denotes certain
T1405 212-217 JJ denotes other
T1406 218-225 NNS denotes viruses
T1407 225-226 -COMMA- denotes ,
T1408 227-232 WDT denotes which
T1409 233-235 VBZ denotes is
T1410 236-245 VBN denotes reflected
T1411 246-248 IN denotes by
T1412 249-252 DT denotes the
T1413 253-260 JJ denotes overall
T1414 261-270 NN denotes structure
T1415 270-271 -COMMA- denotes ,
T1416 272-279 NN denotes density
T1417 280-283 CC denotes and
T1418 284-296 NN denotes oligomannose
T1419 297-306 NN denotes abundance
T1420 307-313 IN denotes across
T1421 314-317 DT denotes the
T1422 318-331 VBG denotes corresponding
T1423 332-340 JJ denotes trimeric
T1424 341-354 NNS denotes glycoproteins
R1407 T1375 T1371 arg1Of adds,Overall
R1408 T1375 T1372 arg1Of adds,","
R1409 T1374 T1373 arg1Of study,this
R30471 T1374 T1375 arg1Of study,adds
R1411 T1377 T1375 arg2Of evidence,adds
R1412 T1377 T1376 arg1Of evidence,further
R1413 T1377 T1378 arg1Of evidence,suggesting
R1414 T1393 T1378 arg2Of constitute,suggesting
R1415 T1393 T1379 arg1Of constitute,that
R1416 T1383 T1380 arg1Of modifications,extensive
R1417 T1383 T1381 arg1Of modifications,N-linked
R1418 T1383 T1382 arg1Of modifications,glycan
R1419 T1383 T1384 arg1Of modifications,of
R1420 T1390 T1384 arg2Of proteins,of
R1421 T1390 T47921 arg1Of proteins,SARS
R1422 T47921 T1386 arg1Of SARS,and
R1423 T1387 T1386 arg2Of MERS,and
R1424 T1390 T1387 arg1Of proteins,MERS
R1425 T1390 T1388 arg1Of proteins,CoV
R1426 T1390 T1389 arg1Of proteins,S
R1427 T1383 T1391 arg1Of modifications,do
R1428 T1393 T1391 arg2Of constitute,do
R1429 T1393 T1392 arg1Of constitute,not
R1430 T1383 T1393 arg1Of modifications,constitute
R1431 T1396 T1393 arg2Of shield,constitute
R1432 T1396 T1394 arg1Of shield,an
R1433 T1396 T1395 arg1Of shield,effective
R1434 T1393 T1397 arg1Of constitute,","
R1435 T1393 T1398 arg1Of constitute,in
R1436 T1399 T1398 arg2Of comparison,in
R1437 T1399 T1400 arg1Of comparison,to
R1438 T1402 T1400 arg2Of shields,to
R1439 T1402 T1401 arg1Of shields,glycan
R1440 T1402 T1403 arg1Of shields,of
R1441 T1406 T1403 arg2Of viruses,of
R1442 T1406 T1404 arg1Of viruses,certain
R1443 T1406 T1405 arg1Of viruses,other
R1444 T1377 T1407 arg1Of evidence,","
R1445 T1377 T1408 arg1Of evidence,which
R1446 T1377 T1409 arg1Of evidence,is
R1447 T1410 T1409 arg2Of reflected,is
R1448 T1414 T1410 arg1Of structure,reflected
R1449 T1377 T1410 arg2Of evidence,reflected
R1450 T1414 T1411 arg2Of structure,by
R1451 T1414 T1412 arg1Of structure,the
R1452 T1414 T1413 arg1Of structure,overall
R1453 T1414 T1415 arg1Of structure,","
R1454 T1417 T1415 arg2Of and,","
R1455 T1416 T1417 arg1Of density,and
R1456 T1419 T1417 arg2Of abundance,and
R1457 T1419 T1418 arg1Of abundance,oligomannose
R1458 T1417 T1420 arg1Of and,across
R1459 T1424 T1420 arg2Of glycoproteins,across
R1460 T1424 T1421 arg1Of glycoproteins,the
R1461 T1424 T1422 arg1Of glycoproteins,corresponding
R1462 T1424 T1423 arg1Of glycoproteins,trimeric

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T144 121-129 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T145 341-354 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T169 121-129 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T170 341-354 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T192 101-105 Species denotes SARS NCBItxid:694009
T193 110-118 Species denotes MERS CoV NCBItxid:1335626
T194 218-225 Species denotes viruses NCBItxid:10239

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T147 0-355 Sentence denotes Overall, this study adds further evidence suggesting that extensive N-linked glycan modifications of SARS and MERS CoV S proteins do not constitute an effective shield, in comparison to glycan shields of certain other viruses, which is reflected by the overall structure, density and oligomannose abundance across the corresponding trimeric glycoproteins.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T88 101-105 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
845 68-83 Chemical denotes N-linked glycan
851 101-105 Disease denotes SARS MESH:D045169
844 110-118 Species denotes MERS CoV Tax:1335626
846 186-192 Chemical denotes glycan MESH:D011134
847 284-296 Chemical denotes oligomannose

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T5044 119-129 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T5077 341-354 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T147 0-355 Sentence denotes Overall, this study adds further evidence suggesting that extensive N-linked glycan modifications of SARS and MERS CoV S proteins do not constitute an effective shield, in comparison to glycan shields of certain other viruses, which is reflected by the overall structure, density and oligomannose abundance across the corresponding trimeric glycoproteins.