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PMC:7253482 / 25337-25554 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
806 45-50 Gene denotes spike Gene:43740568
811 34-44 Species denotes SARS-CoV-2 Tax:2697049
812 129-133 Species denotes ncov Tax:2697049

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T89 34-42 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T90 34-38 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T159 51-56 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T248 206-208 Chemical denotes SI http://purl.obolibrary.org/obo/CHEBI_90326

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T78 199-204 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T76427 0-13 JJ denotes Bioinformatic
T77800 14-22 NN denotes analysis
T78537 23-25 IN denotes of
T86297 26-33 JJ denotes current
T80371 34-44 NN denotes SARS-CoV-2
T13595 45-50 NN denotes spike
T39941 51-56 NNS denotes genes
T50763 57-58 -LRB- denotes (
T65176 58-65 NN denotes n = 566
T2438 66-68 IN denotes as
T93347 69-71 IN denotes of
T69209 72-74 CD denotes 17
T15871 75-80 NNP denotes March
T73572 81-85 CD denotes 2020
T57682 85-86 -RRB- denotes )
T37387 87-91 IN denotes from
T97769 92-104 NN denotes nextstrain61
T59510 105-106 -LRB- denotes (
T27017 106-111 NNS denotes https
T63488 111-112 -COLON- denotes :
T93568 112-133 LS denotes //nextstrain.org/ncov
T43920 133-134 -RRB- denotes )
T64664 135-143 VBD denotes revealed
T48510 144-147 JJ denotes low
T63332 148-156 NN denotes sequence
T32624 157-166 NN denotes diversity
T57322 167-170 CC denotes and
T27673 171-173 DT denotes no
T84080 174-181 NNS denotes changes
T83739 182-184 IN denotes in
T16571 185-198 NN denotes glycosylation
T12246 199-204 NNS denotes sites
T58601 205-206 -LRB- denotes (
T48372 206-208 NN denotes SI
T90304 209-215 NN denotes Fig. 8
T71179 215-216 -RRB- denotes )
R67211 T77800 T76427 arg1Of analysis,Bioinformatic
R38316 T77800 T78537 arg1Of analysis,of
R8557 T39941 T78537 arg2Of genes,of
R52342 T39941 T86297 arg1Of genes,current
R7381 T39941 T80371 arg1Of genes,SARS-CoV-2
R15555 T39941 T13595 arg1Of genes,spike
R65600 T39941 T50763 arg1Of genes,(
R92527 T65176 T50763 arg2Of n = 566,(
R54671 T57682 T50763 arg3Of ),(
R70606 T93347 T2438 arg1Of of,as
R73294 T65176 T93347 arg1Of n = 566,of
R87124 T15871 T93347 arg2Of March,of
R86027 T15871 T69209 arg1Of March,17
R4883 T15871 T73572 arg1Of March,2020
R95164 T77800 T37387 arg1Of analysis,from
R38078 T97769 T37387 arg2Of nextstrain61,from
R62502 T97769 T59510 arg1Of nextstrain61,(
R6412 T27017 T59510 arg2Of https,(
R2333 T63488 T59510 arg3Of :,(
R37616 T64664 T93568 arg1Of revealed,//nextstrain.org/ncov
R2734 T93568 T43920 arg1Of //nextstrain.org/ncov,)
R82991 T77800 T64664 arg1Of analysis,revealed
R86434 T57322 T64664 arg2Of and,revealed
R48827 T32624 T48510 arg1Of diversity,low
R73901 T32624 T63332 arg1Of diversity,sequence
R16270 T32624 T57322 arg1Of diversity,and
R87294 T84080 T57322 arg2Of changes,and
R42509 T84080 T27673 arg1Of changes,no
R99568 T84080 T83739 arg1Of changes,in
R43772 T12246 T83739 arg2Of sites,in
R83070 T12246 T16571 arg1Of sites,glycosylation
R95102 T12246 T58601 arg1Of sites,(
R85973 T90304 T58601 arg2Of Fig. 8,(
R72328 T71179 T58601 arg3Of ),(
R43660 T90304 T48372 arg1Of Fig. 8,SI

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T180 34-44 Species denotes SARS-CoV-2 NCBItxid:2697049
T181 34-38 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T143 0-217 Sentence denotes Bioinformatic analysis of current SARS-CoV-2 spike genes (n = 566 as of 17 March 2020) from nextstrain61 (https://nextstrain.org/ncov) revealed low sequence diversity and no changes in glycosylation sites (SI Fig. 8).

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T84 34-44 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T85 34-38 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
811 34-44 Species denotes SARS-CoV-2 Tax:2697049
806 45-50 Gene denotes spike Gene:43740568
812 129-133 Species denotes ncov Tax:2697049

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T53 185-198 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T48 185-198 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T53 185-198 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T143 0-217 Sentence denotes Bioinformatic analysis of current SARS-CoV-2 spike genes (n = 566 as of 17 March 2020) from nextstrain61 (https://nextstrain.org/ncov) revealed low sequence diversity and no changes in glycosylation sites (SI Fig. 8).