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PMC:7253482 / 23815-24145 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
777 225-229 Species denotes H3N2 Tax:119210
778 234-238 Species denotes H1N1 Tax:114727
780 74-83 Species denotes influenza Tax:11320

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T138 49-62 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T77 74-83 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T146 16-19 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T147 84-87 http://purl.obolibrary.org/obo/CLO_0051582 denotes HAs
T148 104-105 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T149 239-242 http://purl.obolibrary.org/obo/CLO_0051582 denotes HAs

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T242 49-62 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T68 149-154 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T74425 0-4 DT denotes This
T28812 5-15 NN denotes phenomenon
T23330 16-19 VBZ denotes has
T79957 20-24 VBN denotes been
T88747 25-33 VBN denotes observed
T37978 34-36 IN denotes on
T66756 37-42 JJ denotes other
T49403 43-48 JJ denotes viral
T71298 49-62 NNS denotes glycoproteins
T42034 62-63 -COMMA- denotes ,
T50579 64-73 VBG denotes including
T39729 74-83 NN denotes influenza
T5616 84-87 NNS denotes HAs
T5660 87-88 -COMMA- denotes ,
T25906 89-94 WRB denotes where
T12419 95-100 EX denotes there
T16685 101-103 VBZ denotes is
T69838 104-105 DT denotes a
T24412 106-111 NN denotes limit
T2009 112-114 TO denotes to
T53210 115-118 DT denotes the
T7550 119-131 NN denotes accumulation
T70799 132-134 IN denotes of
T50138 135-148 NN denotes glycosylation
T17645 149-154 NNS denotes sites
T91429 155-159 WDT denotes that
T69288 160-163 MD denotes can
T77299 164-166 VB denotes be
T39985 167-179 VBN denotes incorporated
T22591 180-182 IN denotes in
T39676 183-192 NN denotes vivo57,58
T98764 192-193 -COMMA- denotes ,
T66750 194-202 VBN denotes compared
T34506 203-207 IN denotes with
T30497 208-210 IN denotes in
T49179 211-218 NN denotes vitro59
T8001 218-219 -COMMA- denotes ,
T19500 220-224 IN denotes with
T55151 225-229 NN denotes H3N2
T55814 230-233 CC denotes and
T64906 234-238 NN denotes H1N1
T93681 239-242 VBZ denotes HAs
T72733 243-252 VBG denotes replacing
T10927 253-261 VBG denotes existing
T23904 262-266 NNS denotes PNGs
T45261 267-273 RB denotes rather
T77923 274-278 IN denotes than
T40157 279-290 RB denotes continually
T93082 291-297 VBG denotes adding
T56943 298-302 PRP denotes them
T51235 303-307 IN denotes upon
T22651 308-311 DT denotes the
T77822 312-329 NN denotes glycoprotein22,58
R19513 T28812 T74425 arg1Of phenomenon,This
R29694 T28812 T23330 arg1Of phenomenon,has
R27361 T88747 T23330 arg2Of observed,has
R5614 T28812 T79957 arg1Of phenomenon,been
R18321 T88747 T79957 arg2Of observed,been
R22442 T28812 T88747 arg2Of phenomenon,observed
R64110 T88747 T37978 arg1Of observed,on
R55649 T71298 T37978 arg2Of glycoproteins,on
R52881 T71298 T66756 arg1Of glycoproteins,other
R23203 T71298 T49403 arg1Of glycoproteins,viral
R47946 T71298 T42034 arg1Of glycoproteins,","
R10631 T71298 T50579 arg1Of glycoproteins,including
R78201 T5616 T50579 arg2Of HAs,including
R23093 T5616 T39729 arg1Of HAs,influenza
R80086 T5616 T5660 arg1Of HAs,","
R2241 T5616 T25906 arg1Of HAs,where
R93062 T55814 T25906 arg2Of and,where
R70659 T12419 T16685 arg1Of there,is
R10800 T24412 T16685 arg2Of limit,is
R24676 T24412 T69838 arg1Of limit,a
R70842 T24412 T2009 arg1Of limit,to
R46674 T7550 T2009 arg2Of accumulation,to
R92976 T7550 T53210 arg1Of accumulation,the
R14070 T7550 T70799 arg1Of accumulation,of
R96918 T17645 T70799 arg2Of sites,of
R17152 T17645 T50138 arg1Of sites,glycosylation
R4234 T17645 T91429 arg1Of sites,that
R5523 T17645 T69288 arg1Of sites,can
R81378 T39985 T69288 arg2Of incorporated,can
R23056 T17645 T77299 arg1Of sites,be
R76589 T39985 T77299 arg2Of incorporated,be
R59877 T17645 T39985 arg2Of sites,incorporated
R11557 T39985 T22591 arg1Of incorporated,in
R29198 T39676 T22591 arg2Of "vivo57,58",in
R53490 T16685 T98764 arg1Of is,","
R59003 T16685 T66750 arg1Of is,compared
R25556 T34506 T66750 arg2Of with,compared
R46291 T49179 T34506 arg2Of vitro59,with
R4552 T34506 T30497 arg1Of with,in
R71016 T66750 T8001 arg1Of compared,","
R47712 T19500 T8001 arg2Of with,","
R55972 T16685 T19500 arg1Of is,with
R53459 T55151 T19500 arg2Of H3N2,with
R17066 T16685 T55814 arg1Of is,and
R80364 T93681 T55814 arg2Of HAs,and
R65830 T64906 T93681 arg1Of H1N1,HAs
R95558 T93082 T93681 arg2Of adding,HAs
R10724 T23904 T72733 arg2Of PNGs,replacing
R1625 T93681 T72733 modOf HAs,replacing
R39821 T23904 T10927 arg1Of PNGs,existing
R43325 T23904 T45261 arg1Of PNGs,rather
R24475 T45261 T77923 arg1Of rather,than
R59560 T40157 T77923 arg2Of continually,than
R16019 T56943 T93082 arg2Of them,adding
R74388 T55814 T51235 arg1Of and,upon
R28704 T77822 T51235 arg2Of "glycoprotein22,58",upon
R10463 T77822 T22651 arg1Of "glycoprotein22,58",the

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T137 49-62 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T164 49-62 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T167 225-229 Species denotes H3N2 NCBItxid:119210
T168 234-238 Species denotes H1N1 NCBItxid:114727

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T135 0-330 Sentence denotes This phenomenon has been observed on other viral glycoproteins, including influenza HAs, where there is a limit to the accumulation of glycosylation sites that can be incorporated in vivo57,58, compared with in vitro59, with H3N2 and H1N1 HAs replacing existing PNGs rather than continually adding them upon the glycoprotein22,58.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T72 74-83 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
780 74-83 Species denotes influenza Tax:11320
777 225-229 Species denotes H3N2 Tax:119210
778 234-238 Species denotes H1N1 Tax:114727

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T4926 49-62 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T48 135-148 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T43 135-148 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T47 135-148 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T135 0-330 Sentence denotes This phenomenon has been observed on other viral glycoproteins, including influenza HAs, where there is a limit to the accumulation of glycosylation sites that can be incorporated in vivo57,58, compared with in vitro59, with H3N2 and H1N1 HAs replacing existing PNGs rather than continually adding them upon the glycoprotein22,58.