PMC:7253482 / 23815-24145
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
777 | 225-229 | Species | denotes | H3N2 | Tax:119210 |
778 | 234-238 | Species | denotes | H1N1 | Tax:114727 |
780 | 74-83 | Species | denotes | influenza | Tax:11320 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T138 | 49-62 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T77 | 74-83 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T146 | 16-19 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T147 | 84-87 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | HAs |
T148 | 104-105 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T149 | 239-242 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | HAs |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T242 | 49-62 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T68 | 149-154 | http://purl.obolibrary.org/obo/BFO_0000029 | denotes | sites |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T74425 | 0-4 | DT | denotes | This |
T28812 | 5-15 | NN | denotes | phenomenon |
T23330 | 16-19 | VBZ | denotes | has |
T79957 | 20-24 | VBN | denotes | been |
T88747 | 25-33 | VBN | denotes | observed |
T37978 | 34-36 | IN | denotes | on |
T66756 | 37-42 | JJ | denotes | other |
T49403 | 43-48 | JJ | denotes | viral |
T71298 | 49-62 | NNS | denotes | glycoproteins |
T42034 | 62-63 | -COMMA- | denotes | , |
T50579 | 64-73 | VBG | denotes | including |
T39729 | 74-83 | NN | denotes | influenza |
T5616 | 84-87 | NNS | denotes | HAs |
T5660 | 87-88 | -COMMA- | denotes | , |
T25906 | 89-94 | WRB | denotes | where |
T12419 | 95-100 | EX | denotes | there |
T16685 | 101-103 | VBZ | denotes | is |
T69838 | 104-105 | DT | denotes | a |
T24412 | 106-111 | NN | denotes | limit |
T2009 | 112-114 | TO | denotes | to |
T53210 | 115-118 | DT | denotes | the |
T7550 | 119-131 | NN | denotes | accumulation |
T70799 | 132-134 | IN | denotes | of |
T50138 | 135-148 | NN | denotes | glycosylation |
T17645 | 149-154 | NNS | denotes | sites |
T91429 | 155-159 | WDT | denotes | that |
T69288 | 160-163 | MD | denotes | can |
T77299 | 164-166 | VB | denotes | be |
T39985 | 167-179 | VBN | denotes | incorporated |
T22591 | 180-182 | IN | denotes | in |
T39676 | 183-192 | NN | denotes | vivo57,58 |
T98764 | 192-193 | -COMMA- | denotes | , |
T66750 | 194-202 | VBN | denotes | compared |
T34506 | 203-207 | IN | denotes | with |
T30497 | 208-210 | IN | denotes | in |
T49179 | 211-218 | NN | denotes | vitro59 |
T8001 | 218-219 | -COMMA- | denotes | , |
T19500 | 220-224 | IN | denotes | with |
T55151 | 225-229 | NN | denotes | H3N2 |
T55814 | 230-233 | CC | denotes | and |
T64906 | 234-238 | NN | denotes | H1N1 |
T93681 | 239-242 | VBZ | denotes | HAs |
T72733 | 243-252 | VBG | denotes | replacing |
T10927 | 253-261 | VBG | denotes | existing |
T23904 | 262-266 | NNS | denotes | PNGs |
T45261 | 267-273 | RB | denotes | rather |
T77923 | 274-278 | IN | denotes | than |
T40157 | 279-290 | RB | denotes | continually |
T93082 | 291-297 | VBG | denotes | adding |
T56943 | 298-302 | PRP | denotes | them |
T51235 | 303-307 | IN | denotes | upon |
T22651 | 308-311 | DT | denotes | the |
T77822 | 312-329 | NN | denotes | glycoprotein22,58 |
R19513 | T28812 | T74425 | arg1Of | phenomenon,This |
R29694 | T28812 | T23330 | arg1Of | phenomenon,has |
R27361 | T88747 | T23330 | arg2Of | observed,has |
R5614 | T28812 | T79957 | arg1Of | phenomenon,been |
R18321 | T88747 | T79957 | arg2Of | observed,been |
R22442 | T28812 | T88747 | arg2Of | phenomenon,observed |
R64110 | T88747 | T37978 | arg1Of | observed,on |
R55649 | T71298 | T37978 | arg2Of | glycoproteins,on |
R52881 | T71298 | T66756 | arg1Of | glycoproteins,other |
R23203 | T71298 | T49403 | arg1Of | glycoproteins,viral |
R47946 | T71298 | T42034 | arg1Of | glycoproteins,"," |
R10631 | T71298 | T50579 | arg1Of | glycoproteins,including |
R78201 | T5616 | T50579 | arg2Of | HAs,including |
R23093 | T5616 | T39729 | arg1Of | HAs,influenza |
R80086 | T5616 | T5660 | arg1Of | HAs,"," |
R2241 | T5616 | T25906 | arg1Of | HAs,where |
R93062 | T55814 | T25906 | arg2Of | and,where |
R70659 | T12419 | T16685 | arg1Of | there,is |
R10800 | T24412 | T16685 | arg2Of | limit,is |
R24676 | T24412 | T69838 | arg1Of | limit,a |
R70842 | T24412 | T2009 | arg1Of | limit,to |
R46674 | T7550 | T2009 | arg2Of | accumulation,to |
R92976 | T7550 | T53210 | arg1Of | accumulation,the |
R14070 | T7550 | T70799 | arg1Of | accumulation,of |
R96918 | T17645 | T70799 | arg2Of | sites,of |
R17152 | T17645 | T50138 | arg1Of | sites,glycosylation |
R4234 | T17645 | T91429 | arg1Of | sites,that |
R5523 | T17645 | T69288 | arg1Of | sites,can |
R81378 | T39985 | T69288 | arg2Of | incorporated,can |
R23056 | T17645 | T77299 | arg1Of | sites,be |
R76589 | T39985 | T77299 | arg2Of | incorporated,be |
R59877 | T17645 | T39985 | arg2Of | sites,incorporated |
R11557 | T39985 | T22591 | arg1Of | incorporated,in |
R29198 | T39676 | T22591 | arg2Of | "vivo57,58",in |
R53490 | T16685 | T98764 | arg1Of | is,"," |
R59003 | T16685 | T66750 | arg1Of | is,compared |
R25556 | T34506 | T66750 | arg2Of | with,compared |
R46291 | T49179 | T34506 | arg2Of | vitro59,with |
R4552 | T34506 | T30497 | arg1Of | with,in |
R71016 | T66750 | T8001 | arg1Of | compared,"," |
R47712 | T19500 | T8001 | arg2Of | with,"," |
R55972 | T16685 | T19500 | arg1Of | is,with |
R53459 | T55151 | T19500 | arg2Of | H3N2,with |
R17066 | T16685 | T55814 | arg1Of | is,and |
R80364 | T93681 | T55814 | arg2Of | HAs,and |
R65830 | T64906 | T93681 | arg1Of | H1N1,HAs |
R95558 | T93082 | T93681 | arg2Of | adding,HAs |
R10724 | T23904 | T72733 | arg2Of | PNGs,replacing |
R1625 | T93681 | T72733 | modOf | HAs,replacing |
R39821 | T23904 | T10927 | arg1Of | PNGs,existing |
R43325 | T23904 | T45261 | arg1Of | PNGs,rather |
R24475 | T45261 | T77923 | arg1Of | rather,than |
R59560 | T40157 | T77923 | arg2Of | continually,than |
R16019 | T56943 | T93082 | arg2Of | them,adding |
R74388 | T55814 | T51235 | arg1Of | and,upon |
R28704 | T77822 | T51235 | arg2Of | "glycoprotein22,58",upon |
R10463 | T77822 | T22651 | arg1Of | "glycoprotein22,58",the |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T137 | 49-62 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T164 | 49-62 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T167 | 225-229 | Species | denotes | H3N2 | NCBItxid:119210 |
T168 | 234-238 | Species | denotes | H1N1 | NCBItxid:114727 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T135 | 0-330 | Sentence | denotes | This phenomenon has been observed on other viral glycoproteins, including influenza HAs, where there is a limit to the accumulation of glycosylation sites that can be incorporated in vivo57,58, compared with in vitro59, with H3N2 and H1N1 HAs replacing existing PNGs rather than continually adding them upon the glycoprotein22,58. |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T72 | 74-83 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
780 | 74-83 | Species | denotes | influenza | Tax:11320 |
777 | 225-229 | Species | denotes | H3N2 | Tax:119210 |
778 | 234-238 | Species | denotes | H1N1 | Tax:114727 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T4926 | 49-62 | Protein | denotes | glycoproteins | https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8 |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T48 | 135-148 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T43 | 135-148 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T47 | 135-148 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T135 | 0-330 | Sentence | denotes | This phenomenon has been observed on other viral glycoproteins, including influenza HAs, where there is a limit to the accumulation of glycosylation sites that can be incorporated in vivo57,58, compared with in vitro59, with H3N2 and H1N1 HAs replacing existing PNGs rather than continually adding them upon the glycoprotein22,58. |