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PMC:7253482 / 22764-22945 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
734 92-95 Gene denotes GPC Gene:2995
745 62-69 CellLine denotes HEK293F CVCL:6642

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T133 10-23 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T134 70-75 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T135 165-171 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T136 175-180 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T5 165-171 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T132 70-75 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T133 120-125 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T134 165-171 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T135 165-171 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T136 165-171 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T137 175-180 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T239 10-23 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T240 172-174 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T57 70-75 http://purl.obolibrary.org/obo/CL_0000000 denotes cells
T58 120-125 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T59 175-180 http://purl.obolibrary.org/obo/CL_0000000 denotes cells

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T61338 0-3 DT denotes All
T48920 4-9 JJ denotes viral
T68543 10-23 NNS denotes glycoproteins
T82274 24-32 VBN denotes analysed
T26853 33-37 VBD denotes were
T71248 38-47 VBN denotes expressed
T33142 48-50 IN denotes as
T69877 51-58 NNS denotes trimers
T70780 59-61 IN denotes in
T61720 62-69 NN denotes HEK293F
T11163 70-75 NNS denotes cells
T6955 76-81 RB denotes apart
T40144 82-86 IN denotes from
T86025 87-91 NN denotes LASV
T38606 92-95 NN denotes GPC
T52914 95-96 -COMMA- denotes ,
T35666 97-102 WDT denotes which
T47548 103-106 VBD denotes was
T56105 107-114 VBN denotes derived
T54764 115-119 IN denotes from
T18669 120-130 JJ denotes virus-like
T49812 131-140 NNS denotes particles
T85286 141-145 IN denotes from
T2491 146-157 JJ denotes Madin-Darby
T81144 158-164 JJ denotes canine
T79381 165-171 NN denotes kidney
T4581 172-174 CD denotes II
T55061 175-180 NNS denotes cells
R60211 T68543 T61338 arg1Of glycoproteins,All
R42722 T68543 T48920 arg1Of glycoproteins,viral
R52020 T68543 T82274 arg2Of glycoproteins,analysed
R44667 T68543 T26853 arg1Of glycoproteins,were
R84689 T71248 T26853 arg2Of expressed,were
R23244 T68543 T71248 arg2Of glycoproteins,expressed
R39024 T71248 T33142 arg1Of expressed,as
R14422 T69877 T33142 arg2Of trimers,as
R38169 T69877 T70780 arg1Of trimers,in
R60619 T11163 T70780 arg2Of cells,in
R96798 T11163 T61720 arg1Of cells,HEK293F
R96790 T11163 T6955 arg1Of cells,apart
R44107 T6955 T40144 arg1Of apart,from
R65398 T38606 T40144 arg2Of GPC,from
R51633 T38606 T86025 arg1Of GPC,LASV
R96070 T38606 T52914 arg1Of GPC,","
R62312 T38606 T35666 arg1Of GPC,which
R23171 T38606 T47548 arg1Of GPC,was
R24376 T56105 T47548 arg2Of derived,was
R72771 T38606 T56105 arg2Of GPC,derived
R67041 T56105 T54764 arg1Of derived,from
R58633 T49812 T54764 arg2Of particles,from
R37988 T49812 T18669 arg1Of particles,virus-like
R87260 T49812 T85286 arg1Of particles,from
R85123 T55061 T85286 arg2Of cells,from
R12683 T55061 T2491 arg1Of cells,Madin-Darby
R51133 T55061 T81144 arg1Of cells,canine
R78518 T55061 T79381 arg1Of cells,kidney
R24262 T55061 T4581 arg1Of cells,II

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T132 10-23 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T133 70-75 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T134 165-171 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T135 175-180 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T162 10-23 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T160 87-91 Species denotes LASV NCBItxid:11620

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T130 0-181 Sentence denotes All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived from virus-like particles from Madin-Darby canine kidney II cells.

LitCovid-sample-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T5 165-171 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
745 62-69 CellLine denotes HEK293F CVCL:6642
734 92-95 Gene denotes GPC Gene:2995

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T4840 10-23 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8
T4925 92-95 Protein denotes GPC https://www.uniprot.org/uniprot/P03711

LitCovid-sample-PD-MAT

Id Subject Object Predicate Lexical cue
T3 165-171 http://purl.obolibrary.org/obo/MAT_0000119 denotes kidney

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T130 0-181 Sentence denotes All viral glycoproteins analysed were expressed as trimers in HEK293F cells apart from LASV GPC, which was derived from virus-like particles from Madin-Darby canine kidney II cells.

LitCovid-sample-Glycan

Id Subject Object Predicate Lexical cue
T49 0-3 https://glytoucan.org/Structures/Glycans/G05518TD denotes All