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PMC:7253482 / 20149-20288 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T112 32-35 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T113 43-55 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T114 126-129 Body_part denotes map http://purl.org/sig/ont/fma/fma67847

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T113 70-71 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T114 101-102 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T115 113-120 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T204 29-31 Chemical denotes EM http://purl.obolibrary.org/obo/CHEBI_73507
T205 43-55 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T206 113-120 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T68941 0-8 JJ denotes Low-pass
T98545 9-17 VBN denotes filtered
T5712 18-19 -LRB- denotes (
T65635 19-22 NN denotes lpf
T36825 22-23 -RRB- denotes )
T66628 24-31 NN denotes cryo-EM
T90188 32-35 NN denotes map
T57750 36-38 IN denotes of
T25808 39-42 DT denotes the
T69826 43-55 NN denotes glycoprotein
T87240 56-66 VBN denotes visualised
T62278 67-69 IN denotes at
T88612 70-71 DT denotes a
T55069 72-75 JJ denotes low
T38898 76-83 NN denotes contour
T68027 84-89 NN denotes level
T69920 90-95 IN denotes along
T22579 96-100 IN denotes with
T51416 101-102 DT denotes a
T26917 103-112 JJ denotes simulated
T72481 113-125 JJ denotes peptide-only
T91266 126-129 NN denotes map
T43073 130-138 NN denotes overlaid
R7635 T90188 T68941 arg1Of map,Low-pass
R50307 T90188 T98545 arg1Of map,filtered
R44751 T90188 T5712 arg1Of map,(
R94760 T65635 T5712 arg2Of lpf,(
R81995 T36825 T5712 arg3Of ),(
R54195 T90188 T66628 arg1Of map,cryo-EM
R93131 T90188 T57750 arg1Of map,of
R32904 T69826 T57750 arg2Of glycoprotein,of
R22697 T69826 T25808 arg1Of glycoprotein,the
R67130 T69826 T87240 arg2Of glycoprotein,visualised
R62598 T87240 T62278 arg1Of visualised,at
R52700 T68027 T62278 arg2Of level,at
R84135 T68027 T88612 arg1Of level,a
R86475 T68027 T55069 arg1Of level,low
R91771 T68027 T38898 arg1Of level,contour
R27443 T22579 T69920 arg1Of with,along
R76131 T87240 T22579 arg1Of visualised,with
R74494 T43073 T22579 arg2Of overlaid,with
R82819 T43073 T51416 arg1Of overlaid,a
R67128 T43073 T26917 arg1Of overlaid,simulated
R3623 T43073 T72481 arg1Of overlaid,peptide-only
R82360 T43073 T91266 arg1Of overlaid,map

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T111 32-35 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T112 43-55 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T113 126-129 Body_part denotes map http://purl.org/sig/ont/fma/fma67847

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T140 43-55 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T141 113-120 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T117 0-139 Sentence denotes Low-pass filtered (lpf) cryo-EM map of the glycoprotein visualised at a low contour level along with a simulated peptide-only map overlaid.

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3966 43-55 Protein denotes glycoprotein https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T117 0-139 Sentence denotes Low-pass filtered (lpf) cryo-EM map of the glycoprotein visualised at a low contour level along with a simulated peptide-only map overlaid.