PMC:7253482 / 19065-19383
Annnotations
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"660","span":{"begin":63,"end":66},"obj":"Gene"},{"id":"670","span":{"begin":57,"end":62},"obj":"Species"},{"id":"678","span":{"begin":39,"end":45},"obj":"Chemical"},{"id":"679","span":{"begin":94,"end":100},"obj":"Chemical"},{"id":"680","span":{"begin":101,"end":107},"obj":"Chemical"},{"id":"681","span":{"begin":140,"end":152},"obj":"Chemical"},{"id":"682","span":{"begin":180,"end":187},"obj":"Chemical"},{"id":"683","span":{"begin":245,"end":251},"obj":"Chemical"},{"id":"684","span":{"begin":299,"end":305},"obj":"Chemical"},{"id":"692","span":{"begin":191,"end":195},"obj":"Disease"}],"attributes":[{"id":"A660","pred":"tao:has_database_id","subj":"660","obj":"Gene:64006"},{"id":"A670","pred":"tao:has_database_id","subj":"670","obj":"Tax:11676"},{"id":"A678","pred":"tao:has_database_id","subj":"678","obj":"MESH:D011134"},{"id":"A679","pred":"tao:has_database_id","subj":"679","obj":"MESH:D011134"},{"id":"A680","pred":"tao:has_database_id","subj":"680","obj":"MESH:D011134"},{"id":"A682","pred":"tao:has_database_id","subj":"682","obj":"MESH:D011134"},{"id":"A683","pred":"tao:has_database_id","subj":"683","obj":"MESH:D011134"},{"id":"A684","pred":"tao:has_database_id","subj":"684","obj":"MESH:D011134"},{"id":"A692","pred":"tao:has_database_id","subj":"692","obj":"MESH:D045169"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T108","span":{"begin":57,"end":60},"obj":"Body_part"}],"attributes":[{"id":"A108","pred":"fma_id","subj":"T108","obj":"http://purl.org/sig/ont/fma/fma278683"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T70","span":{"begin":191,"end":195},"obj":"Disease"}],"attributes":[{"id":"A70","pred":"mondo_id","subj":"T70","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T200","span":{"begin":180,"end":187},"obj":"Chemical"}],"attributes":[{"id":"A200","pred":"chebi_id","subj":"T200","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-sample-Enju
{"project":"LitCovid-sample-Enju","denotations":[{"id":"T60289","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T75223","span":{"begin":3,"end":10},"obj":"VBP"},{"id":"T57545","span":{"begin":11,"end":14},"obj":"DT"},{"id":"T48330","span":{"begin":15,"end":21},"obj":"RB"},{"id":"T87308","span":{"begin":22,"end":38},"obj":"JJ"},{"id":"T1558","span":{"begin":39,"end":45},"obj":"NN"},{"id":"T99824","span":{"begin":46,"end":53},"obj":"NN"},{"id":"T59798","span":{"begin":54,"end":56},"obj":"IN"},{"id":"T56235","span":{"begin":57,"end":62},"obj":"NN"},{"id":"T14383","span":{"begin":63,"end":66},"obj":"NN"},{"id":"T33263","span":{"begin":67,"end":70},"obj":"CC"},{"id":"T4213","span":{"begin":71,"end":79},"obj":"NN"},{"id":"T91161","span":{"begin":80,"end":83},"obj":"IN"},{"id":"T79082","span":{"begin":84,"end":93},"obj":"JJ"},{"id":"T66189","span":{"begin":94,"end":107},"obj":"NN"},{"id":"T48593","span":{"begin":108,"end":120},"obj":"NNS"},{"id":"T42535","span":{"begin":120,"end":121},"obj":"-COMMA-"},{"id":"T14663","span":{"begin":122,"end":132},"obj":"RB"},{"id":"T44869","span":{"begin":133,"end":135},"obj":"IN"},{"id":"T77065","span":{"begin":136,"end":139},"obj":"DT"},{"id":"T90752","span":{"begin":140,"end":152},"obj":"NN"},{"id":"T24864","span":{"begin":153,"end":158},"obj":"NN"},{"id":"T20998","span":{"begin":159,"end":166},"obj":"NNS"},{"id":"T55492","span":{"begin":166,"end":167},"obj":"-COMMA-"},{"id":"T69929","span":{"begin":168,"end":175},"obj":"IN"},{"id":"T90575","span":{"begin":176,"end":179},"obj":"DT"},{"id":"T59031","span":{"begin":180,"end":187},"obj":"NNS"},{"id":"T94235","span":{"begin":188,"end":190},"obj":"IN"},{"id":"T22232","span":{"begin":191,"end":195},"obj":"NNP"},{"id":"T7541","span":{"begin":196,"end":197},"obj":"NNP"},{"id":"T66013","span":{"begin":198,"end":204},"obj":"VBP"},{"id":"T27090","span":{"begin":205,"end":209},"obj":"RBR"},{"id":"T7370","span":{"begin":210,"end":218},"obj":"VBN"},{"id":"T67487","span":{"begin":219,"end":222},"obj":"CC"},{"id":"T50530","span":{"begin":223,"end":227},"obj":"VBP"},{"id":"T21892","span":{"begin":228,"end":231},"obj":"DT"},{"id":"T55852","span":{"begin":232,"end":244},"obj":"JJ"},{"id":"T70160","span":{"begin":245,"end":251},"obj":"NN"},{"id":"T80844","span":{"begin":252,"end":260},"obj":"NNS"},{"id":"T83936","span":{"begin":261,"end":265},"obj":"WDT"},{"id":"T81018","span":{"begin":266,"end":269},"obj":"VBP"},{"id":"T68036","span":{"begin":270,"end":273},"obj":"DT"},{"id":"T82951","span":{"begin":274,"end":282},"obj":"NN"},{"id":"T16903","span":{"begin":283,"end":285},"obj":"IN"},{"id":"T2902","span":{"begin":286,"end":288},"obj":"DT"},{"id":"T18742","span":{"begin":289,"end":298},"obj":"JJ"},{"id":"T88640","span":{"begin":299,"end":305},"obj":"NN"},{"id":"T57983","span":{"begin":306,"end":317},"obj":"NN"}],"relations":[{"id":"R57363","pred":"arg1Of","subj":"T60289","obj":"T75223"},{"id":"R66074","pred":"arg2Of","subj":"T99824","obj":"T75223"},{"id":"R81587","pred":"arg1Of","subj":"T99824","obj":"T57545"},{"id":"R35059","pred":"arg1Of","subj":"T87308","obj":"T48330"},{"id":"R7274","pred":"arg1Of","subj":"T99824","obj":"T87308"},{"id":"R88937","pred":"arg1Of","subj":"T99824","obj":"T1558"},{"id":"R66924","pred":"arg1Of","subj":"T99824","obj":"T59798"},{"id":"R61464","pred":"arg2Of","subj":"T33263","obj":"T59798"},{"id":"R83562","pred":"arg1Of","subj":"T14383","obj":"T56235"},{"id":"R85086","pred":"arg1Of","subj":"T14383","obj":"T33263"},{"id":"R78120","pred":"arg2Of","subj":"T4213","obj":"T33263"},{"id":"R42903","pred":"arg1Of","subj":"T33263","obj":"T91161"},{"id":"R57290","pred":"arg2Of","subj":"T48593","obj":"T91161"},{"id":"R88967","pred":"arg1Of","subj":"T48593","obj":"T79082"},{"id":"R10709","pred":"arg1Of","subj":"T48593","obj":"T66189"},{"id":"R45240","pred":"arg1Of","subj":"T99824","obj":"T42535"},{"id":"R16806","pred":"arg1Of","subj":"T44869","obj":"T14663"},{"id":"R95483","pred":"arg1Of","subj":"T99824","obj":"T44869"},{"id":"R56293","pred":"arg2Of","subj":"T20998","obj":"T44869"},{"id":"R89068","pred":"arg1Of","subj":"T20998","obj":"T77065"},{"id":"R85023","pred":"arg1Of","subj":"T20998","obj":"T90752"},{"id":"R14595","pred":"arg1Of","subj":"T20998","obj":"T24864"},{"id":"R53601","pred":"arg1Of","subj":"T69929","obj":"T55492"},{"id":"R41847","pred":"arg1Of","subj":"T75223","obj":"T69929"},{"id":"R72281","pred":"arg2Of","subj":"T67487","obj":"T69929"},{"id":"R41117","pred":"arg1Of","subj":"T59031","obj":"T90575"},{"id":"R11577","pred":"arg1Of","subj":"T59031","obj":"T94235"},{"id":"R76941","pred":"arg2Of","subj":"T7541","obj":"T94235"},{"id":"R61132","pred":"arg1Of","subj":"T7541","obj":"T22232"},{"id":"R12423","pred":"arg1Of","subj":"T59031","obj":"T66013"},{"id":"R21940","pred":"arg2Of","subj":"T7370","obj":"T66013"},{"id":"R42488","pred":"arg1Of","subj":"T7370","obj":"T27090"},{"id":"R49214","pred":"arg1Of","subj":"T59031","obj":"T7370"},{"id":"R75703","pred":"arg1Of","subj":"T66013","obj":"T67487"},{"id":"R14857","pred":"arg2Of","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observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-sample-PD-FMA
{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T107","span":{"begin":57,"end":60},"obj":"Body_part"}],"attributes":[{"id":"A107","pred":"fma_id","subj":"T107","obj":"http://purl.org/sig/ont/fma/fma278683"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-sample-CHEBI
{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T138","span":{"begin":180,"end":187},"obj":"Chemical"}],"attributes":[{"id":"A138","pred":"chebi_id","subj":"T138","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-sample-PD-NCBITaxon
{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T143","span":{"begin":57,"end":62},"obj":"Species"},{"id":"T144","span":{"begin":191,"end":195},"obj":"Species"}],"attributes":[{"id":"A143","pred":"ncbi_taxonomy_id","subj":"T143","obj":"NCBItxid:11676"},{"id":"A144","pred":"ncbi_taxonomy_id","subj":"T144","obj":"NCBItxid:694009"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-sample-sentences
{"project":"LitCovid-sample-sentences","denotations":[{"id":"T111","span":{"begin":0,"end":318},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-sample-PD-MONDO
{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T65","span":{"begin":191,"end":195},"obj":"Disease"}],"attributes":[{"id":"A65","pred":"mondo_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-sample-Pubtator
{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"678","span":{"begin":39,"end":45},"obj":"Chemical"},{"id":"670","span":{"begin":57,"end":62},"obj":"Species"},{"id":"660","span":{"begin":63,"end":66},"obj":"Gene"},{"id":"679","span":{"begin":94,"end":100},"obj":"Chemical"},{"id":"680","span":{"begin":101,"end":107},"obj":"Chemical"},{"id":"681","span":{"begin":140,"end":152},"obj":"Chemical"},{"id":"682","span":{"begin":180,"end":187},"obj":"Chemical"},{"id":"692","span":{"begin":191,"end":195},"obj":"Disease"},{"id":"683","span":{"begin":245,"end":251},"obj":"Chemical"},{"id":"684","span":{"begin":299,"end":305},"obj":"Chemical"}],"attributes":[{"id":"A680","pred":"pubann:denotes","subj":"680","obj":"MESH:D011134"},{"id":"A660","pred":"pubann:denotes","subj":"660","obj":"Gene:64006"},{"id":"A692","pred":"pubann:denotes","subj":"692","obj":"MESH:D045169"},{"id":"A678","pred":"pubann:denotes","subj":"678","obj":"MESH:D011134"},{"id":"A682","pred":"pubann:denotes","subj":"682","obj":"MESH:D011134"},{"id":"A670","pred":"pubann:denotes","subj":"670","obj":"Tax:11676"},{"id":"A679","pred":"pubann:denotes","subj":"679","obj":"MESH:D011134"},{"id":"A683","pred":"pubann:denotes","subj":"683","obj":"MESH:D011134"},{"id":"A684","pred":"pubann:denotes","subj":"684","obj":"MESH:D011134"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-sample-UniProt
{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T3962","span":{"begin":63,"end":66},"obj":"Protein"}],"attributes":[{"id":"A3962","pred":"uniprot_id","subj":"T3962","obj":"https://www.uniprot.org/uniprot/C1JJY3"},{"id":"A3963","pred":"uniprot_id","subj":"T3962","obj":"https://www.uniprot.org/uniprot/P24123"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T111","span":{"begin":0,"end":318},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"We observe the nearly all-encompassing glycan density on HIV-1 Env and evidence for extensive glycan–glycan interactions, especially in the oligomannose patch regions, whereas the glycans on SARS S appear more isolated and lack the wide-ranging glycan networks that are the hallmark of an effective glycan shield54,55."}