PMC:7253482 / 18811-19064
Annnotations
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"659","span":{"begin":224,"end":227},"obj":"Gene"},{"id":"669","span":{"begin":218,"end":223},"obj":"Species"},{"id":"676","span":{"begin":180,"end":186},"obj":"Chemical"},{"id":"677","span":{"begin":228,"end":234},"obj":"Chemical"},{"id":"691","span":{"begin":175,"end":179},"obj":"Disease"}],"attributes":[{"id":"A659","pred":"tao:has_database_id","subj":"659","obj":"Gene:64006"},{"id":"A669","pred":"tao:has_database_id","subj":"669","obj":"Tax:11676"},{"id":"A676","pred":"tao:has_database_id","subj":"676","obj":"MESH:D011134"},{"id":"A677","pred":"tao:has_database_id","subj":"677","obj":"MESH:D011134"},{"id":"A691","pred":"tao:has_database_id","subj":"691","obj":"MESH:D045169"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T107","span":{"begin":218,"end":221},"obj":"Body_part"}],"attributes":[{"id":"A107","pred":"fma_id","subj":"T107","obj":"http://purl.org/sig/ont/fma/fma278683"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T69","span":{"begin":175,"end":179},"obj":"Disease"}],"attributes":[{"id":"A69","pred":"mondo_id","subj":"T69","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T106","span":{"begin":23,"end":24},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-sample-Enju
{"project":"LitCovid-sample-Enju","denotations":[{"id":"T10071","span":{"begin":0,"end":7},"obj":"RB"},{"id":"T88433","span":{"begin":7,"end":8},"obj":"-COMMA-"},{"id":"T97506","span":{"begin":9,"end":11},"obj":"PRP"},{"id":"T94206","span":{"begin":12,"end":18},"obj":"VBD"},{"id":"T91691","span":{"begin":19,"end":22},"obj":"WRB"},{"id":"T17411","span":{"begin":23,"end":24},"obj":"DT"},{"id":"T2527","span":{"begin":25,"end":31},"obj":"JJ"},{"id":"T82430","span":{"begin":32,"end":43},"obj":"NN"},{"id":"T32469","span":{"begin":44,"end":46},"obj":"IN"},{"id":"T40028","span":{"begin":47,"end":55},"obj":"JJ"},{"id":"T93291","span":{"begin":56,"end":65},"obj":"NN"},{"id":"T10413","span":{"begin":66,"end":69},"obj":"CC"},{"id":"T2487","span":{"begin":70,"end":87},"obj":"NN"},{"id":"T78379","span":{"begin":87,"end":88},"obj":"-COMMA-"},{"id":"T27010","span":{"begin":89,"end":91},"obj":"RB"},{"id":"T32044","span":{"begin":92,"end":96},"obj":"RB"},{"id":"T89162","span":{"begin":97,"end":99},"obj":"IN"},{"id":"T8187","span":{"begin":100,"end":102},"obj":"NN"},{"id":"T99213","span":{"begin":103,"end":114},"obj":"NN"},{"id":"T14190","span":{"begin":115,"end":123},"obj":"NN"},{"id":"T81037","span":{"begin":123,"end":124},"obj":"-COMMA-"},{"id":"T87732","span":{"begin":125,"end":128},"obj":"MD"},{"id":"T9264","span":{"begin":129,"end":135},"obj":"VB"},{"id":"T36472","span":{"begin":136,"end":139},"obj":"DT"},{"id":"T15866","span":{"begin":140,"end":150},"obj":"RB"},{"id":"T33845","span":{"begin":151,"end":157},"obj":"VBN"},{"id":"T31709","span":{"begin":158,"end":167},"obj":"NN"},{"id":"T97881","span":{"begin":168,"end":170},"obj":"IN"},{"id":"T77189","span":{"begin":171,"end":174},"obj":"DT"},{"id":"T22984","span":{"begin":175,"end":179},"obj":"NNP"},{"id":"T32877","span":{"begin":180,"end":186},"obj":"NN"},{"id":"T15037","span":{"begin":187,"end":193},"obj":"NN"},{"id":"T70541","span":{"begin":194,"end":197},"obj":"CC"},{"id":"T30415","span":{"begin":198,"end":205},"obj":"VB"},{"id":"T37461","span":{"begin":206,"end":208},"obj":"PRP"},{"id":"T52236","span":{"begin":209,"end":213},"obj":"IN"},{"id":"T25513","span":{"begin":214,"end":217},"obj":"DT"},{"id":"T63380","span":{"begin":218,"end":223},"obj":"NN"},{"id":"T80636","span":{"begin":224,"end":227},"obj":"NN"},{"id":"T69159","span":{"begin":228,"end":234},"obj":"NN"},{"id":"T3337","span":{"begin":235,"end":243},"obj":"NN"},{"id":"T64033","span":{"begin":244,"end":245},"obj":"-LRB-"},{"id":"T94502","span":{"begin":245,"end":251},"obj":"CD"},{"id":"T94581","span":{"begin":251,"end":252},"obj":"-RRB-"}],"relations":[{"id":"R24318","pred":"arg1Of","subj":"T94206","obj":"T10071"},{"id":"R26175","pred":"arg1Of","subj":"T94206","obj":"T88433"},{"id":"R53086","pred":"arg1Of","subj":"T97506","obj":"T94206"},{"id":"R62847","pred":"arg2Of","subj":"T91691","obj":"T94206"},{"id":"R2380","pred":"arg1Of","subj":"T70541","obj":"T91691"},{"id":"R23756","pred":"arg1Of","subj":"T89162","obj":"T17411"},{"id":"R55557","pred":"arg1Of","subj":"T82430","obj":"T2527"},{"id":"R59136","pred":"arg1Of","subj":"T82430","obj":"T32469"},{"id":"R91541","pred":"arg2Of","subj":"T10413","obj":"T32469"},{"id":"R34127","pred":"arg1Of","subj":"T93291","obj":"T40028"},{"id":"R99542","pred":"arg1Of","subj":"T93291","obj":"T10413"},{"id":"R31235","pred":"arg2Of","subj":"T2487","obj":"T10413"},{"id":"R21549","pred":"arg1Of","subj":"T89162","obj":"T78379"},{"id":"R94567","pred":"arg1Of","subj":"T89162","obj":"T27010"},{"id":"R56677","pred":"arg1Of","subj":"T89162","obj":"T32044"},{"id":"R84025","pred":"arg1Of","subj":"T82430","obj":"T89162"},{"id":"R77886","pred":"arg2Of","subj":"T14190","obj":"T89162"},{"id":"R74774","pred":"arg1Of","subj":"T14190","obj":"T8187"},{"id":"R32077","pred":"arg1Of","subj":"T14190","obj":"T99213"},{"id":"R45513","pred":"arg1Of","subj":"T70541","obj":"T81037"},{"id":"R52288","pred":"arg1Of","subj":"T89162","obj":"T87732"},{"id":"R85159","pred":"arg2Of","subj":"T70541","obj":"T87732"},{"id":"R23242","pred":"arg1Of","subj":"T89162","obj":"T9264"},{"id":"R90965","pred":"arg2Of","subj":"T31709","obj":"T9264"},{"id":"R30322","pred":"arg1Of","subj":"T31709","obj":"T36472"},{"id":"R11789","pred":"arg1Of","subj":"T31709","obj":"T15866"},{"id":"R87205","pred":"arg2Of","subj":"T31709","obj":"T33845"},{"id":"R9606","pred":"arg1Of","subj":"T31709","obj":"T97881"},{"id":"R67400","pred":"arg2Of","subj":"T15037","obj":"T97881"},{"id":"R54575","pred":"arg1Of","subj":"T15037","obj":"T77189"},{"id":"R61674","pred":"arg1Of","subj":"T15037","obj":"T22984"},{"id":"R67642","pred":"arg1Of","subj":"T15037","obj":"T32877"},{"id":"R16567","pred":"arg1Of","subj":"T9264","obj":"T70541"},{"id":"R41315","pred":"arg2Of","subj":"T30415","obj":"T70541"},{"id":"R38659","pred":"arg1Of","subj":"T89162","obj":"T30415"},{"id":"R40791","pred":"arg2Of","subj":"T37461","obj":"T30415"},{"id":"R83994","pred":"arg1Of","subj":"T30415","obj":"T52236"},{"id":"R97825","pred":"arg2Of","subj":"T3337","obj":"T52236"},{"id":"R73479","p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we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-sample-PD-FMA
{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T106","span":{"begin":218,"end":221},"obj":"Body_part"}],"attributes":[{"id":"A106","pred":"fma_id","subj":"T106","obj":"http://purl.org/sig/ont/fma/fma278683"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-sample-PD-NCBITaxon
{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T141","span":{"begin":175,"end":179},"obj":"Species"},{"id":"T142","span":{"begin":218,"end":223},"obj":"Species"}],"attributes":[{"id":"A141","pred":"ncbi_taxonomy_id","subj":"T141","obj":"NCBItxid:694009"},{"id":"A142","pred":"ncbi_taxonomy_id","subj":"T142","obj":"NCBItxid:11676"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-sample-sentences
{"project":"LitCovid-sample-sentences","denotations":[{"id":"T110","span":{"begin":0,"end":253},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-sample-PD-MONDO
{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T64","span":{"begin":175,"end":179},"obj":"Disease"}],"attributes":[{"id":"A64","pred":"mondo_id","subj":"T64","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-sample-Pubtator
{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"691","span":{"begin":175,"end":179},"obj":"Disease"},{"id":"676","span":{"begin":180,"end":186},"obj":"Chemical"},{"id":"669","span":{"begin":218,"end":223},"obj":"Species"},{"id":"659","span":{"begin":224,"end":227},"obj":"Gene"},{"id":"677","span":{"begin":228,"end":234},"obj":"Chemical"}],"attributes":[{"id":"A691","pred":"pubann:denotes","subj":"691","obj":"MESH:D045169"},{"id":"A676","pred":"pubann:denotes","subj":"676","obj":"MESH:D011134"},{"id":"A669","pred":"pubann:denotes","subj":"669","obj":"Tax:11676"},{"id":"A659","pred":"pubann:denotes","subj":"659","obj":"Gene:64006"},{"id":"A677","pred":"pubann:denotes","subj":"677","obj":"MESH:D011134"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-sample-UniProt
{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T3960","span":{"begin":224,"end":227},"obj":"Protein"}],"attributes":[{"id":"A3960","pred":"uniprot_id","subj":"T3960","obj":"https://www.uniprot.org/uniprot/C1JJY3"},{"id":"A3961","pred":"uniprot_id","subj":"T3960","obj":"https://www.uniprot.org/uniprot/P24123"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T110","span":{"begin":0,"end":253},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5)."}