> top > docs > PMC:7253482 > spans > 18811-19064 > annotations

PMC:7253482 / 18811-19064 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
659 224-227 Gene denotes Env Gene:64006
669 218-223 Species denotes HIV-1 Tax:11676
676 180-186 Chemical denotes glycan MESH:D011134
677 228-234 Chemical denotes glycan MESH:D011134
691 175-179 Disease denotes SARS MESH:D045169

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T107 218-221 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T69 175-179 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T106 23-24 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T10071 0-7 RB denotes However
T88433 7-8 -COMMA- denotes ,
T97506 9-11 PRP denotes we
T94206 12-18 VBD denotes showed
T91691 19-22 WRB denotes how
T17411 23-24 DT denotes a
T2527 25-31 JJ denotes simple
T82430 32-43 NN denotes combination
T32469 44-46 IN denotes of
T40028 47-55 JJ denotes low-pass
T93291 56-65 NN denotes filtering
T10413 66-69 CC denotes and
T2487 70-87 NN denotes auto-thresholding
T78379 87-88 -COMMA- denotes ,
T27010 89-91 RB denotes as
T32044 92-96 RB denotes well
T89162 97-99 IN denotes as
T8187 100-102 NN denotes 3D
T99213 103-114 NN denotes variability
T14190 115-123 NN denotes analysis
T81037 123-124 -COMMA- denotes ,
T87732 125-128 MD denotes can
T9264 129-135 VB denotes reveal
T36472 136-139 DT denotes the
T15866 140-150 RB denotes previously
T33845 151-157 VBN denotes hidden
T31709 158-167 NN denotes structure
T97881 168-170 IN denotes of
T77189 171-174 DT denotes the
T22984 175-179 NNP denotes SARS
T32877 180-186 NN denotes glycan
T15037 187-193 NN denotes shield
T70541 194-197 CC denotes and
T30415 198-205 VB denotes compare
T37461 206-208 PRP denotes it
T52236 209-213 IN denotes with
T25513 214-217 DT denotes the
T63380 218-223 NN denotes HIV-1
T80636 224-227 NN denotes Env
T69159 228-234 NN denotes glycan
T3337 235-243 NN denotes shield51
T64033 244-245 -LRB- denotes (
T94502 245-251 CD denotes Fig. 5
T94581 251-252 -RRB- denotes )
R24318 T94206 T10071 arg1Of showed,However
R26175 T94206 T88433 arg1Of showed,","
R53086 T97506 T94206 arg1Of we,showed
R62847 T91691 T94206 arg2Of how,showed
R2380 T70541 T91691 arg1Of and,how
R23756 T89162 T17411 arg1Of as,a
R55557 T82430 T2527 arg1Of combination,simple
R59136 T82430 T32469 arg1Of combination,of
R91541 T10413 T32469 arg2Of and,of
R34127 T93291 T40028 arg1Of filtering,low-pass
R99542 T93291 T10413 arg1Of filtering,and
R31235 T2487 T10413 arg2Of auto-thresholding,and
R21549 T89162 T78379 arg1Of as,","
R94567 T89162 T27010 arg1Of as,as
R56677 T89162 T32044 arg1Of as,well
R84025 T82430 T89162 arg1Of combination,as
R77886 T14190 T89162 arg2Of analysis,as
R74774 T14190 T8187 arg1Of analysis,3D
R32077 T14190 T99213 arg1Of analysis,variability
R45513 T70541 T81037 arg1Of and,","
R52288 T89162 T87732 arg1Of as,can
R85159 T70541 T87732 arg2Of and,can
R23242 T89162 T9264 arg1Of as,reveal
R90965 T31709 T9264 arg2Of structure,reveal
R30322 T31709 T36472 arg1Of structure,the
R11789 T31709 T15866 arg1Of structure,previously
R87205 T31709 T33845 arg2Of structure,hidden
R9606 T31709 T97881 arg1Of structure,of
R67400 T15037 T97881 arg2Of shield,of
R54575 T15037 T77189 arg1Of shield,the
R61674 T15037 T22984 arg1Of shield,SARS
R67642 T15037 T32877 arg1Of shield,glycan
R16567 T9264 T70541 arg1Of reveal,and
R41315 T30415 T70541 arg2Of compare,and
R38659 T89162 T30415 arg1Of as,compare
R40791 T37461 T30415 arg2Of it,compare
R83994 T30415 T52236 arg1Of compare,with
R97825 T3337 T52236 arg2Of shield51,with
R73479 T3337 T25513 arg1Of shield51,the
R23692 T3337 T63380 arg1Of shield51,HIV-1
R50639 T3337 T80636 arg1Of shield51,Env
R28975 T3337 T69159 arg1Of shield51,glycan
R5473 T3337 T64033 arg1Of shield51,(
R8522 T94502 T64033 arg2Of Fig. 5,(
R58315 T94581 T64033 arg3Of ),(

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T106 218-221 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T141 175-179 Species denotes SARS NCBItxid:694009
T142 218-223 Species denotes HIV-1 NCBItxid:11676

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T110 0-253 Sentence denotes However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5).

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T64 175-179 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
691 175-179 Disease denotes SARS MESH:D045169
676 180-186 Chemical denotes glycan MESH:D011134
669 218-223 Species denotes HIV-1 Tax:11676
659 224-227 Gene denotes Env Gene:64006
677 228-234 Chemical denotes glycan MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3960 224-227 Protein denotes Env https://www.uniprot.org/uniprot/C1JJY3|https://www.uniprot.org/uniprot/P24123

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T110 0-253 Sentence denotes However, we showed how a simple combination of low-pass filtering and auto-thresholding, as well as 3D variability analysis, can reveal the previously hidden structure of the SARS glycan shield and compare it with the HIV-1 Env glycan shield51 (Fig. 5).