PMC:7253482 / 14415-14623 JSONTXT

Annnotations TAB JSON ListView MergeView

    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"533","span":{"begin":58,"end":61},"obj":"Species"}],"attributes":[{"id":"A533","pred":"tao:has_database_id","subj":"533","obj":"Tax:11118"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T87","span":{"begin":110,"end":120},"obj":"Body_part"},{"id":"T88","span":{"begin":135,"end":143},"obj":"Body_part"}],"attributes":[{"id":"A87","pred":"fma_id","subj":"T87","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A88","pred":"fma_id","subj":"T88","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T86","span":{"begin":110,"end":129},"obj":"http://purl.obolibrary.org/obo/CHEBI_33708"},{"id":"T87","span":{"begin":110,"end":129},"obj":"http://purl.obolibrary.org/obo/PR_000036907"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T164","span":{"begin":90,"end":97},"obj":"Chemical"},{"id":"T165","span":{"begin":110,"end":129},"obj":"Chemical"},{"id":"T166","span":{"begin":110,"end":115},"obj":"Chemical"},{"id":"T167","span":{"begin":116,"end":120},"obj":"Chemical"},{"id":"T168","span":{"begin":135,"end":143},"obj":"Chemical"}],"attributes":[{"id":"A164","pred":"chebi_id","subj":"T164","obj":"http://purl.obolibrary.org/obo/CHEBI_46787"},{"id":"A165","pred":"chebi_id","subj":"T165","obj":"http://purl.obolibrary.org/obo/CHEBI_33708"},{"id":"A166","pred":"chebi_id","subj":"T166","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A167","pred":"chebi_id","subj":"T167","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A168","pred":"chebi_id","subj":"T168","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-sample-PD-IDO

    {"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T38","span":{"begin":14,"end":27},"obj":"http://purl.obolibrary.org/obo/BFO_0000034"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T85948","span":{"begin":3,"end":13},"obj":"VBG"},{"id":"T35584","span":{"begin":14,"end":27},"obj":"NN"},{"id":"T9810","span":{"begin":30,"end":38},"obj":"NN"},{"id":"T60681","span":{"begin":39,"end":54},"obj":"NN"},{"id":"T14534","span":{"begin":55,"end":57},"obj":"IN"},{"id":"T70071","span":{"begin":58,"end":61},"obj":"NN"},{"id":"T46208","span":{"begin":62,"end":68},"obj":"NNS"},{"id":"T65633","span":{"begin":69,"end":71},"obj":"PRP"},{"id":"T71210","span":{"begin":72,"end":84},"obj":"VBD"},{"id":"T65773","span":{"begin":85,"end":89},"obj":"IN"},{"id":"T55109","span":{"begin":90,"end":108},"obj":"JJ"},{"id":"T1585","span":{"begin":108,"end":109},"obj":"-COMMA-"},{"id":"T39672","span":{"begin":110,"end":120},"obj":"JJ"},{"id":"T20594","span":{"begin":121,"end":129},"obj":"NNS"},{"id":"T55010","span":{"begin":130,"end":132},"obj":"IN"},{"id":"T92344","span":{"begin":133,"end":134},"obj":"NN"},{"id":"T27449","span":{"begin":135,"end":143},"obj":"NNS"},{"id":"T7753","span":{"begin":144,"end":149},"obj":"MD"},{"id":"T87805","span":{"begin":150,"end":152},"obj":"VB"},{"id":"T76109","span":{"begin":153,"end":163},"obj":"VBG"},{"id":"T49022","span":{"begin":164,"end":170},"obj":"JJR"},{"id":"T38215","span":{"begin":171,"end":176},"obj":"NNS"},{"id":"T48007","span":{"begin":177,"end":179},"obj":"IN"},{"id":"T86087","span":{"begin":180,"end":189},"obj":"NNS"},{"id":"T52952","span":{"begin":190,"end":198},"obj":"VBN"},{"id":"T99241","span":{"begin":199,"end":203},"obj":"IN"}],"relations":[{"id":"R68677","pred":"arg2Of","subj":"T35584","obj":"T85948"},{"id":"R38141","pred":"arg1Of","subj":"T60681","obj":"T9810"},{"id":"R72145","pred":"arg1Of","subj":"T60681","obj":"T14534"},{"id":"R69926","pred":"arg2Of","subj":"T46208","obj":"T14534"},{"id":"R24936","pred":"arg1Of","subj":"T46208","obj":"T70071"},{"id":"R61681","pred":"arg1Of","subj":"T65633","obj":"T71210"},{"id":"R96091","pred":"arg2Of","subj":"T76109","obj":"T71210"},{"id":"R22162","pred":"arg1Of","subj":"T76109","obj":"T65773"},{"id":"R85221","pred":"arg1Of","subj":"T20594","obj":"T55109"},{"id":"R72861","pred":"arg1Of","subj":"T55109","obj":"T1585"},{"id":"R77034","pred":"arg2Of","subj":"T39672","obj":"T1585"},{"id":"R36891","pred":"arg1Of","subj":"T20594","obj":"T39672"},{"id":"R40189","pred":"arg1Of","subj":"T20594","obj":"T55010"},{"id":"R95749","pred":"arg2Of","subj":"T27449","obj":"T55010"},{"id":"R96156","pred":"arg1Of","subj":"T27449","obj":"T92344"},{"id":"R72203","pred":"arg1Of","subj":"T20594","obj":"T7753"},{"id":"R54302","pred":"arg2Of","subj":"T76109","obj":"T7753"},{"id":"R95941","pred":"arg1Of","subj":"T20594","obj":"T87805"},{"id":"R17994","pred":"arg2Of","subj":"T76109","obj":"T87805"},{"id":"R16092","pred":"arg1Of","subj":"T20594","obj":"T76109"},{"id":"R25200","pred":"arg2Of","subj":"T38215","obj":"T76109"},{"id":"R60609","pred":"arg1Of","subj":"T38215","obj":"T49022"},{"id":"R64991","pred":"arg1Of","subj":"T38215","obj":"T48007"},{"id":"R81741","pred":"arg2Of","subj":"T86087","obj":"T48007"},{"id":"R95788","pred":"arg1Of","subj":"T76109","obj":"T52952"},{"id":"R82820","pred":"arg2Of","subj":"T99241","obj":"T52952"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T86","span":{"begin":110,"end":120},"obj":"Body_part"},{"id":"T87","span":{"begin":135,"end":143},"obj":"Body_part"}],"attributes":[{"id":"A86","pred":"fma_id","subj":"T86","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A87","pred":"fma_id","subj":"T87","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T122","span":{"begin":110,"end":129},"obj":"Chemical"},{"id":"T123","span":{"begin":135,"end":143},"obj":"Chemical"}],"attributes":[{"id":"A122","pred":"chebi_id","subj":"T122","obj":"http://purl.obolibrary.org/obo/CHEBI_33708"},{"id":"A123","pred":"chebi_id","subj":"T123","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-sample-sentences

    {"project":"LitCovid-sample-sentences","denotations":[{"id":"T86","span":{"begin":30,"end":68},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"533","span":{"begin":58,"end":61},"obj":"Species"}],"attributes":[{"id":"A533","pred":"pubann:denotes","subj":"533","obj":"Tax:11118"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-sample-UniProt

    {"project":"LitCovid-sample-UniProt","denotations":[{"id":"T3670","span":{"begin":133,"end":143},"obj":"Protein"}],"attributes":[{"id":"A3670","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9UIP0"},{"id":"A3671","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9UIN9"},{"id":"A3672","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9UIN8"},{"id":"A3673","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9UIN7"},{"id":"A3674","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9UIN6"},{"id":"A3675","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9UBH8"},{"id":"A3676","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9NRH8"},{"id":"A3677","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9NRH7"},{"id":"A3678","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9NRH6"},{"id":"A3679","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9NRH5"},{"id":"A3680","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9NRH4"},{"id":"A3681","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9NPG5"},{"id":"A3682","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9NPE0"},{"id":"A3683","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q9NP52"},{"id":"A3684","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q95IF9"},{"id":"A3685","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q8N5P3"},{"id":"A3686","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q8IZU6"},{"id":"A3687","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q8IZU5"},{"id":"A3688","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q8IZU4"},{"id":"A3689","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q86Z04"},{"id":"A3690","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q7YR44"},{"id":"A3691","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q7LA71"},{"id":"A3692","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q7LA70"},{"id":"A3693","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q5STD2"},{"id":"A3694","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q5SQ85"},{"id":"A3695","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q1XI16"},{"id":"A3696","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q1XI12"},{"id":"A3697","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/Q15517"},{"id":"A3698","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/O43509"},{"id":"A3699","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/O19084"},{"id":"A3700","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/B0UYZ7"},{"id":"A3701","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/B0S7V2"},{"id":"A3702","pred":"uniprot_id","subj":"T3670","obj":"https://www.uniprot.org/uniprot/A5A6L9"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T86","span":{"begin":30,"end":68},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"ly perturbing functionality.\n\nSequence diversification of CoV spikes\nWe hypothesized that solvent-accessible, amino-acid residues on S proteins would be undergoing higher rates of mutations compared with buri"}