PMC:7253482 / 13873-14324 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"522","span":{"begin":228,"end":231},"obj":"Gene"},{"id":"523","span":{"begin":222,"end":227},"obj":"Species"},{"id":"524","span":{"begin":250,"end":259},"obj":"Species"},{"id":"525","span":{"begin":240,"end":243},"obj":"Gene"},{"id":"526","span":{"begin":39,"end":43},"obj":"Gene"},{"id":"527","span":{"begin":96,"end":103},"obj":"Chemical"},{"id":"528","span":{"begin":427,"end":443},"obj":"Chemical"},{"id":"529","span":{"begin":69,"end":73},"obj":"Disease"},{"id":"530","span":{"begin":204,"end":208},"obj":"Disease"},{"id":"531","span":{"begin":366,"end":370},"obj":"Disease"}],"attributes":[{"id":"A522","pred":"tao:has_database_id","subj":"522","obj":"Gene:64006"},{"id":"A523","pred":"tao:has_database_id","subj":"523","obj":"Tax:11676"},{"id":"A524","pred":"tao:has_database_id","subj":"524","obj":"Tax:11320"},{"id":"A525","pred":"tao:has_database_id","subj":"525","obj":"Gene:2995"},{"id":"A526","pred":"tao:has_database_id","subj":"526","obj":"Gene:1803"},{"id":"A527","pred":"tao:has_database_id","subj":"527","obj":"MESH:D011134"},{"id":"A529","pred":"tao:has_database_id","subj":"529","obj":"MESH:D018352"},{"id":"A530","pred":"tao:has_database_id","subj":"530","obj":"MESH:D045169"},{"id":"A531","pred":"tao:has_database_id","subj":"531","obj":"MESH:D018352"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T85","span":{"begin":184,"end":192},"obj":"Body_part"},{"id":"T86","span":{"begin":222,"end":225},"obj":"Body_part"}],"attributes":[{"id":"A85","pred":"fma_id","subj":"T85","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A86","pred":"fma_id","subj":"T86","obj":"http://purl.org/sig/ont/fma/fma278683"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-PD-MONDO

    {"project":"LitCovid-PD-MONDO","denotations":[{"id":"T52","span":{"begin":204,"end":208},"obj":"Disease"},{"id":"T53","span":{"begin":250,"end":259},"obj":"Disease"}],"attributes":[{"id":"A52","pred":"mondo_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A53","pred":"mondo_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/MONDO_0005812"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T161","span":{"begin":96,"end":103},"obj":"Chemical"},{"id":"T162","span":{"begin":184,"end":192},"obj":"Chemical"},{"id":"T163","span":{"begin":436,"end":443},"obj":"Chemical"}],"attributes":[{"id":"A161","pred":"chebi_id","subj":"T161","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A162","pred":"chebi_id","subj":"T162","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A163","pred":"chebi_id","subj":"T163","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-sample-PD-IDO

    {"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T34","span":{"begin":61,"end":65},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T35","span":{"begin":154,"end":159},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T36","span":{"begin":318,"end":331},"obj":"http://purl.obolibrary.org/obo/BFO_0000034"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T2696","span":{"begin":84,"end":92},"obj":"VBN"},{"id":"T26958","span":{"begin":0,"end":11},"obj":"NN"},{"id":"T7334","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T85070","span":{"begin":13,"end":15},"obj":"PRP"},{"id":"T1822","span":{"begin":16,"end":18},"obj":"VBZ"},{"id":"T40337","span":{"begin":19,"end":29},"obj":"JJ"},{"id":"T90378","span":{"begin":30,"end":34},"obj":"IN"},{"id":"T34257","span":{"begin":35,"end":38},"obj":"DT"},{"id":"T66548","span":{"begin":39,"end":43},"obj":"NN"},{"id":"T75367","span":{"begin":44,"end":60},"obj":"JJ"},{"id":"T76130","span":{"begin":61,"end":65},"obj":"NN"},{"id":"T72556","span":{"begin":66,"end":68},"obj":"IN"},{"id":"T49036","span":{"begin":69,"end":73},"obj":"NNS"},{"id":"T45911","span":{"begin":74,"end":75},"obj":"NN"},{"id":"T21250","span":{"begin":76,"end":79},"obj":"VBD"},{"id":"T8376","span":{"begin":80,"end":83},"obj":"RB"},{"id":"T90865","span":{"begin":93,"end":95},"obj":"IN"},{"id":"T29223","span":{"begin":96,"end":103},"obj":"NNS"},{"id":"T85418","span":{"begin":104,"end":105},"obj":"-LRB-"},{"id":"T83410","span":{"begin":105,"end":112},"obj":"NN"},{"id":"T92859","span":{"begin":112,"end":113},"obj":"-RRB-"},{"id":"T98108","span":{"begin":113,"end":114},"obj":"-COMMA-"},{"id":"T94718","span":{"begin":115,"end":117},"obj":"IN"},{"id":"T75995","span":{"begin":118,"end":126},"obj":"VBN"},{"id":"T33346","span":{"begin":127,"end":130},"obj":"IN"},{"id":"T37727","span":{"begin":131,"end":136},"obj":"JJ"},{"id":"T65600","span":{"begin":137,"end":153},"obj":"JJ"},{"id":"T6494","span":{"begin":154,"end":159},"obj":"NNS"},{"id":"T57622","span":{"begin":160,"end":162},"obj":"IN"},{"id":"T15659","span":{"begin":163,"end":168},"obj":"NN"},{"id":"T77211","span":{"begin":169,"end":170},"obj":"CD"},{"id":"T77114","span":{"begin":171,"end":176},"obj":"JJ"},{"id":"T21676","span":{"begin":177,"end":183},"obj":"NN"},{"id":"T55295","span":{"begin":184,"end":192},"obj":"NNS"},{"id":"T74940","span":{"begin":192,"end":193},"obj":"-COMMA-"},{"id":"T82828","span":{"begin":194,"end":203},"obj":"VBG"},{"id":"T94991","span":{"begin":204,"end":208},"obj":"NNP"},{"id":"T30576","span":{"begin":209,"end":210},"obj":"NNP"},{"id":"T72214","span":{"begin":211,"end":212},"obj":"-LRB-"},{"id":"T78031","span":{"begin":212,"end":219},"obj":"NN"},{"id":"T67457","span":{"begin":219,"end":220},"obj":"-RRB-"},{"id":"T6464","span":{"begin":220,"end":221},"obj":"-COMMA-"},{"id":"T4572","span":{"begin":222,"end":227},"obj":"NN"},{"id":"T27072","span":{"begin":228,"end":233},"obj":"NN"},{"id":"T51710","span":{"begin":233,"end":234},"obj":"-COMMA-"},{"id":"T37781","span":{"begin":235,"end":239},"obj":"NN"},{"id":"T43889","span":{"begin":240,"end":245},"obj":"NN"},{"id":"T95596","span":{"begin":246,"end":249},"obj":"CC"},{"id":"T81584","span":{"begin":250,"end":259},"obj":"NN"},{"id":"T23338","span":{"begin":260,"end":264},"obj":"NN"},{"id":"T38368","span":{"begin":266,"end":268},"obj":"PRP"},{"id":"T7627","span":{"begin":269,"end":276},"obj":"VBP"},{"id":"T64380","span":{"begin":277,"end":281},"obj":"IN"},{"id":"T64096","span":{"begin":282,"end":286},"obj":"DT"},{"id":"T56477","span":{"begin":287,"end":289},"obj":"VBZ"},{"id":"T19767","span":{"begin":290,"end":296},"obj":"RB"},{"id":"T70981","span":{"begin":297,"end":300},"obj":"JJ"},{"id":"T34848","span":{"begin":301,"end":303},"obj":"TO"},{"id":"T31069","span":{"begin":304,"end":307},"obj":"DT"},{"id":"T33383","span":{"begin":308,"end":317},"obj":"JJ"},{"id":"T53788","span":{"begin":318,"end":331},"obj":"NN"},{"id":"T92413","span":{"begin":332,"end":334},"obj":"IN"},{"id":"T48963","span":{"begin":335,"end":338},"obj":"DT"},{"id":"T14314","span":{"begin":339,"end":355},"obj":"JJ"},{"id":"T65172","span":{"begin":356,"end":362},"obj":"NN"},{"id":"T24472","span":{"begin":363,"end":365},"obj":"IN"},{"id":"T66405","span":{"begin":366,"end":370},"obj":"NNP"},{"id":"T3759","span":{"begin":371,"end":372},"obj":"NNP"},{"id":"T35971","span":{"begin":372,"end":373},"obj":"-COMMA-"},{"id":"T63119","span":{"begin":374,"end":378},"obj":"WDT"},{"id":"T19398","span":{"begin":379,"end":384},"obj":"MD"},{"id":"T5062","span":{"begin":385,"end":387},"obj":"VB"},{"id":"T26453","span":{"begin":388,"end":398},"obj":"RB"},{"id":"T99830","span":{"begin":399,"end":407},"obj":"VBN"},{"id":"T79196","span":{"begin":408,"end":410},"obj":"IN"},{"id":"T29715","span":{"begin":411,"end":414},"obj":"DT"},{"id":"T15993","span":{"begin":415,"end":423},"obj":"NN"},{"id":"T46581","span":{"begin":424,"end":426},"obj":"IN"},{"id":"T41531","span":{"begin":427,"end":435},"obj":"JJ"},{"id":"T84168","span":{"begin":436,"end":443},"obj":"NNS"},{"id":"T31775","span":{"begin":443,"end":444},"obj":"-COMMA-"}],"relations":[{"id":"R51342","pred":"arg2Of","subj":"T85070","obj":"T7334"},{"id":"R57469","pred":"arg2Of","subj":"T40337","obj":"T1822"},{"id":"R43979","pred":"arg2Of","subj":"T2696","obj":"T40337"},{"id":"R57152","pred":"arg1Of","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it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T84","span":{"begin":184,"end":192},"obj":"Body_part"},{"id":"T85","span":{"begin":222,"end":225},"obj":"Body_part"}],"attributes":[{"id":"A84","pred":"fma_id","subj":"T84","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A85","pred":"fma_id","subj":"T85","obj":"http://purl.org/sig/ont/fma/fma278683"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T119","span":{"begin":96,"end":103},"obj":"Chemical"},{"id":"T120","span":{"begin":184,"end":192},"obj":"Chemical"},{"id":"T121","span":{"begin":436,"end":443},"obj":"Chemical"}],"attributes":[{"id":"A119","pred":"chebi_id","subj":"T119","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A120","pred":"chebi_id","subj":"T120","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A121","pred":"chebi_id","subj":"T121","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-sample-PD-NCBITaxon

    {"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T96","span":{"begin":69,"end":73},"obj":"Species"},{"id":"T97","span":{"begin":204,"end":208},"obj":"Species"},{"id":"T98","span":{"begin":222,"end":227},"obj":"Species"},{"id":"T99","span":{"begin":235,"end":239},"obj":"Species"},{"id":"T100","span":{"begin":366,"end":370},"obj":"Species"}],"attributes":[{"id":"A96","pred":"ncbi_taxonomy_id","subj":"T96","obj":"NCBItxid:1335626"},{"id":"A97","pred":"ncbi_taxonomy_id","subj":"T97","obj":"NCBItxid:694009"},{"id":"A98","pred":"ncbi_taxonomy_id","subj":"T98","obj":"NCBItxid:11676"},{"id":"A99","pred":"ncbi_taxonomy_id","subj":"T99","obj":"NCBItxid:11620"},{"id":"A100","pred":"ncbi_taxonomy_id","subj":"T100","obj":"NCBItxid:1335626"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-sample-PD-MONDO

    {"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T47","span":{"begin":204,"end":208},"obj":"Disease"},{"id":"T48","span":{"begin":250,"end":259},"obj":"Disease"}],"attributes":[{"id":"A47","pred":"mondo_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A48","pred":"mondo_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/MONDO_0005812"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"526","span":{"begin":39,"end":43},"obj":"Gene"},{"id":"529","span":{"begin":69,"end":73},"obj":"Disease"},{"id":"527","span":{"begin":96,"end":103},"obj":"Chemical"},{"id":"530","span":{"begin":204,"end":208},"obj":"Disease"},{"id":"523","span":{"begin":222,"end":227},"obj":"Species"},{"id":"522","span":{"begin":228,"end":231},"obj":"Gene"},{"id":"525","span":{"begin":240,"end":243},"obj":"Gene"},{"id":"524","span":{"begin":250,"end":259},"obj":"Species"},{"id":"531","span":{"begin":366,"end":370},"obj":"Disease"},{"id":"528","span":{"begin":427,"end":443},"obj":"Chemical"}],"attributes":[{"id":"A527","pred":"pubann:denotes","subj":"527","obj":"MESH:D011134"},{"id":"A529","pred":"pubann:denotes","subj":"529","obj":"MESH:D018352"},{"id":"A531","pred":"pubann:denotes","subj":"531","obj":"MESH:D018352"},{"id":"A524","pred":"pubann:denotes","subj":"524","obj":"Tax:11320"},{"id":"A525","pred":"pubann:denotes","subj":"525","obj":"Gene:2995"},{"id":"A523","pred":"pubann:denotes","subj":"523","obj":"Tax:11676"},{"id":"A526","pred":"pubann:denotes","subj":"526","obj":"Gene:1803"},{"id":"A530","pred":"pubann:denotes","subj":"530","obj":"MESH:D045169"},{"id":"A522","pred":"pubann:denotes","subj":"522","obj":"Gene:64006"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}

    LitCovid-sample-UniProt

    {"project":"LitCovid-sample-UniProt","denotations":[{"id":"T3669","span":{"begin":39,"end":43},"obj":"Protein"}],"attributes":[{"id":"A3669","pred":"uniprot_id","subj":"T3669","obj":"https://www.uniprot.org/uniprot/Q9N2I7"}],"text":"antibodies8, it is surprising that the DPP4 receptor-binding site of MERS S was not occluded by glycans (Fig. 3a), as observed for other receptor-binding sites of class I viral fusion proteins, including SARS S (Fig. 3b), HIV-1 Env49, LASV GPC24 and influenza HA50. We suggest that this is likely due to the intrinsic functionality of the receptor-binding domain of MERS S, that would be sterically hindered by the presence of N-linked glycans, wherea"}