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PMC:7253482 / 13006-13256 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
409 160-176 Chemical denotes N-linked glycans
510 225-229 Disease denotes SARS MESH:D045169

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T78 4-12 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T79 30-38 Body_part denotes backbone http://purl.org/sig/ont/fma/fma13478
T80 81-91 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T51 225-229 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T148 4-12 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T149 81-86 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T150 87-91 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T151 169-176 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T152 240-242 Chemical denotes SI http://purl.obolibrary.org/obo/CHEBI_90326

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T54383 2-3 NN denotes S
T54985 4-12 NNS denotes proteins
T71503 13-16 VBP denotes are
T68699 17-26 VBN denotes presented
T41652 27-29 IN denotes as
T94309 30-38 NN denotes backbone
T38232 39-45 NNS denotes traces
T35432 46-50 IN denotes with
T7775 51-59 NNS denotes residues
T17162 60-67 VBN denotes colored
T49747 68-77 VBG denotes according
T59844 78-80 TO denotes to
T16213 81-91 JJ denotes amino-acid
T58864 92-101 NN denotes diversity
T92910 103-111 NNS denotes Residues
T14256 112-116 IN denotes with
T40837 117-125 JJ denotes elevated
T80639 126-135 NN denotes diversity
T85890 136-139 VBP denotes are
T71146 140-147 VBN denotes colored
T5339 148-150 IN denotes in
T28847 151-154 JJ denotes red
T85163 154-155 -COMMA- denotes ,
T69312 156-159 CC denotes and
T87041 160-168 VBN denotes N-linked
T76860 169-176 NNS denotes glycans
T24256 177-180 VBP denotes are
T12192 181-190 VBN denotes presented
T65467 191-193 IN denotes as
T23895 194-199 JJ denotes white
T99373 200-208 NNS denotes surfaces
T72420 210-223 RB denotes Interestingly
T27935 223-224 -COMMA- denotes ,
T18688 225-229 NN denotes SARS
T54076 230-233 CC denotes and
T91777 234-238 NN denotes HKU1
T82660 239-240 -LRB- denotes (
T80158 240-242 NN denotes SI
T18287 243-249 NN denotes Fig. 2
T26450 249-250 -RRB- denotes )
R1590 T54985 T54383 arg1Of proteins,S
R27680 T54985 T71503 arg1Of proteins,are
R80868 T68699 T71503 arg2Of presented,are
R21990 T54985 T68699 arg2Of proteins,presented
R19366 T68699 T41652 arg1Of presented,as
R83350 T38232 T41652 arg2Of traces,as
R4519 T38232 T94309 arg1Of traces,backbone
R44314 T38232 T35432 arg1Of traces,with
R94768 T7775 T35432 arg2Of residues,with
R21857 T7775 T17162 arg2Of residues,colored
R61444 T17162 T49747 arg1Of colored,according
R91092 T59844 T49747 arg2Of to,according
R76378 T58864 T59844 arg2Of diversity,to
R11117 T58864 T16213 arg1Of diversity,amino-acid
R40358 T92910 T14256 arg1Of Residues,with
R8307 T80639 T14256 arg2Of diversity,with
R69922 T80639 T40837 arg1Of diversity,elevated
R71914 T92910 T85890 arg1Of Residues,are
R75729 T71146 T85890 arg2Of colored,are
R90522 T92910 T71146 arg2Of Residues,colored
R34840 T71146 T5339 arg1Of colored,in
R2968 T28847 T5339 arg2Of red,in
R30400 T69312 T85163 arg1Of and,","
R90824 T71146 T69312 arg1Of colored,and
R47143 T12192 T69312 arg2Of presented,and
R66919 T76860 T87041 arg2Of glycans,N-linked
R49383 T76860 T24256 arg1Of glycans,are
R55884 T12192 T24256 arg2Of presented,are
R30180 T76860 T12192 arg2Of glycans,presented
R55953 T12192 T65467 arg1Of presented,as
R60416 T99373 T65467 arg2Of surfaces,as
R2531 T99373 T23895 arg1Of surfaces,white
R82082 T18688 T54076 arg1Of SARS,and
R16336 T80158 T82660 arg2Of SI,(
R40261 T26450 T82660 arg3Of ),(
R31936 T80158 T18287 arg1Of SI,Fig. 2

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T77 4-12 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T78 30-38 Body_part denotes backbone http://purl.org/sig/ont/fma/fma13478
T79 81-91 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T108 4-12 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T109 81-86 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T110 169-176 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T94 225-229 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T79 2-102 Sentence denotes S proteins are presented as backbone traces with residues colored according to amino-acid diversity.
T80 103-209 Sentence denotes Residues with elevated diversity are colored in red, and N-linked glycans are presented as white surfaces.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T46 225-229 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
409 160-176 Chemical denotes N-linked glycans
510 225-229 Disease denotes SARS MESH:D045169

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3603 2-12 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T79 2-102 Sentence denotes S proteins are presented as backbone traces with residues colored according to amino-acid diversity.
T80 103-209 Sentence denotes Residues with elevated diversity are colored in red, and N-linked glycans are presented as white surfaces.