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PMC:7253482 / 1226-1479 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
49 79-90 Species denotes coronavirus Tax:11118
50 15-20 Gene denotes spike Gene:43740568
51 68-75 Chemical denotes glycans MESH:D011134
52 91-95 Disease denotes SARS MESH:D045169
53 100-104 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T8 25-33 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T9 107-115 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T5 91-95 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T7 25-33 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T8 68-75 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T9 107-115 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T185 6-8 IN denotes on
T186 9-14 JJ denotes viral
T187 15-20 NN denotes spike
T188 21-22 -LRB- denotes (
T189 22-23 NN denotes S
T190 23-24 -RRB- denotes )
T191 25-33 NNS denotes proteins
T192 35-39 RB denotes Here
T193 40-48 NNP denotes Watanabe
T194 49-51 FW denotes et
T195 52-55 FW denotes al.
T196 56-62 NN denotes report
T197 63-67 IN denotes that
T198 68-75 NNS denotes glycans
T199 76-78 IN denotes of
T200 79-90 NN denotes coronavirus
T201 91-95 NNS denotes SARS
T202 96-99 CC denotes and
T203 100-104 NNP denotes MERS
T204 105-106 NN denotes S
T205 107-115 NNS denotes proteins
T206 116-119 VBP denotes are
T207 120-135 RB denotes heterogeneously
T208 136-147 VBN denotes distributed
T209 148-151 CC denotes and
T210 152-154 VBP denotes do
T211 155-158 RB denotes not
T212 159-163 VB denotes form
T213 164-166 DT denotes an
T214 167-178 JJ denotes efficacious
T215 179-191 JJ denotes high-density
T216 192-198 JJ denotes global
T217 199-205 NN denotes shield
T218 206-211 WDT denotes which
T219 212-217 MD denotes would
T220 218-224 VB denotes ensure
T221 225-234 JJ denotes efficient
T222 235-241 JJ denotes immune
T223 242-249 NN denotes evasion
R180 T191 T185 arg2Of proteins,on
R181 T187 T186 arg1Of spike,viral
R182 T191 T187 arg1Of proteins,spike
R183 T187 T188 arg1Of spike,(
R184 T189 T188 arg2Of S,(
R185 T190 T188 arg3Of ),(
R186 T196 T192 arg1Of report,Here
R187 T195 T193 arg1Of al.,Watanabe
R188 T195 T194 arg1Of al.,et
R189 T195 T196 arg1Of al.,report
R190 T209 T196 arg2Of and,report
R191 T209 T197 arg1Of and,that
R192 T198 T199 arg1Of glycans,of
R193 T202 T199 arg2Of and,of
R194 T201 T200 arg1Of SARS,coronavirus
R195 T201 T202 arg1Of SARS,and
R196 T205 T202 arg2Of proteins,and
R197 T205 T203 arg1Of proteins,MERS
R198 T205 T204 arg1Of proteins,S
R199 T198 T206 arg1Of glycans,are
R200 T208 T206 arg2Of distributed,are
R201 T208 T207 arg1Of distributed,heterogeneously
R202 T198 T208 arg2Of glycans,distributed
R203 T208 T209 arg1Of distributed,and
R204 T212 T209 arg2Of form,and
R205 T198 T210 arg1Of glycans,do
R206 T212 T210 arg2Of form,do
R207 T212 T211 arg1Of form,not
R208 T198 T212 arg1Of glycans,form
R209 T217 T212 arg2Of shield,form
R210 T217 T213 arg1Of shield,an
R211 T217 T214 arg1Of shield,efficacious
R212 T217 T215 arg1Of shield,high-density
R213 T217 T216 arg1Of shield,global
R214 T217 T218 arg1Of shield,which
R215 T217 T219 arg1Of shield,would
R216 T220 T219 arg2Of ensure,would
R217 T217 T220 arg1Of shield,ensure
R218 T223 T220 arg2Of evasion,ensure
R219 T223 T221 arg1Of evasion,efficient
R220 T223 T222 arg1Of evasion,immune

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T8 25-33 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T9 107-115 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T7 25-33 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T8 68-75 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T9 107-115 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T9 91-95 Species denotes SARS NCBItxid:694009
T10 100-104 Species denotes MERS NCBItxid:1335626

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T10 35-250 Sentence denotes Here Watanabe et al. report that glycans of coronavirus SARS and MERS S proteins are heterogeneously distributed and do not form an efficacious high-density global shield which would ensure efficient immune evasion.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T5 91-95 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
50 15-20 Gene denotes spike Gene:43740568
51 68-75 Chemical denotes glycans MESH:D011134
49 79-90 Species denotes coronavirus Tax:11118
52 91-95 Disease denotes SARS MESH:D045169
53 100-104 Disease denotes MERS MESH:D018352

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T648 21-33 Protein denotes (S) proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T681 105-115 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T9 235-249 http://purl.obolibrary.org/obo/GO_0020012 denotes immune evasion
T10 235-249 http://purl.obolibrary.org/obo/GO_0051805 denotes immune evasion

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T9 235-249 http://purl.obolibrary.org/obo/GO_0042783 denotes immune evasion

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T10 235-249 http://purl.obolibrary.org/obo/GO_0042783 denotes immune evasion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T10 35-250 Sentence denotes Here Watanabe et al. report that glycans of coronavirus SARS and MERS S proteins are heterogeneously distributed and do not form an efficacious high-density global shield which would ensure efficient immune evasion.