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PMC:7253233 / 8820-9251 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
293 365-383 Gene denotes C-reactive protein Gene:1401
295 4-11 Species denotes patient Tax:9606
298 298-302 Chemical denotes urea MESH:D014508
299 303-311 Chemical denotes nitrogen MESH:D009584
300 328-338 Chemical denotes creatinine MESH:D003404
310 54-65 Disease denotes lymphopenia MESH:D008231
311 115-127 Disease denotes coagulopathy MESH:D001778
312 242-258 Disease denotes thrombocytopenia MESH:D013921
313 271-290 Disease denotes acute kidney injury MESH:D058186

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T47 91-101 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T48 277-283 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T49 292-297 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T50 376-383 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T36 277-283 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T37 292-297 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T78 54-65 Disease denotes lymphopenia http://purl.obolibrary.org/obo/MONDO_0003783
T79 115-127 Disease denotes coagulopathy http://purl.obolibrary.org/obo/MONDO_0001531
T80 242-258 Disease denotes thrombocytopenia http://purl.obolibrary.org/obo/MONDO_0002049
T81 271-290 Disease denotes acute kidney injury http://purl.obolibrary.org/obo/MONDO_0002492
T82 284-290 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T103 260-263 http://purl.obolibrary.org/obo/CLO_0054061 denotes 132
T104 277-283 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T105 277-283 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T106 277-283 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T107 292-297 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T108 292-297 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T18 200-203 Chemical denotes PTT http://purl.obolibrary.org/obo/CHEBI_3088
T19 298-302 Chemical denotes urea http://purl.obolibrary.org/obo/CHEBI_16199
T20 303-311 Chemical denotes nitrogen http://purl.obolibrary.org/obo/CHEBI_25555
T21 328-338 Chemical denotes creatinine http://purl.obolibrary.org/obo/CHEBI_16737
T22 376-383 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T57 54-65 Phenotype denotes lymphopenia http://purl.obolibrary.org/obo/HP_0001888
T58 115-127 Phenotype denotes coagulopathy http://purl.obolibrary.org/obo/HP_0003256
T59 212-228 Phenotype denotes elevated D-dimer http://purl.obolibrary.org/obo/HP_0033106
T60 242-258 Phenotype denotes thrombocytopenia http://purl.obolibrary.org/obo/HP_0001873
T61 271-290 Phenotype denotes acute kidney injury http://purl.obolibrary.org/obo/HP_0001919

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T69 0-431 Sentence denotes The patient’s laboratory results were significant for lymphopenia (WBC 3.26 k/μl, absolute lymphocyte count 0.70), coagulopathy (international normalised ratio (INR) 2.5, partial thromboplastin time (PTT) 53.9), elevated D-dimer (590 ng/mL), thrombocytopenia (132 k/μl), acute kidney injury (blood urea nitrogen (BUN) 47 mg/dL, creatinine 3.96 mg/dL), and elevated C-reactive protein initially 12.5 mg/L and increased to 26.2 mg/L.