PMC:7253233 / 8820-9251
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 293 | 365-383 | Gene | denotes | C-reactive protein | Gene:1401 |
| 295 | 4-11 | Species | denotes | patient | Tax:9606 |
| 298 | 298-302 | Chemical | denotes | urea | MESH:D014508 |
| 299 | 303-311 | Chemical | denotes | nitrogen | MESH:D009584 |
| 300 | 328-338 | Chemical | denotes | creatinine | MESH:D003404 |
| 310 | 54-65 | Disease | denotes | lymphopenia | MESH:D008231 |
| 311 | 115-127 | Disease | denotes | coagulopathy | MESH:D001778 |
| 312 | 242-258 | Disease | denotes | thrombocytopenia | MESH:D013921 |
| 313 | 271-290 | Disease | denotes | acute kidney injury | MESH:D058186 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T47 | 91-101 | Body_part | denotes | lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
| T48 | 277-283 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
| T49 | 292-297 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T50 | 376-383 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T36 | 277-283 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T37 | 292-297 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T78 | 54-65 | Disease | denotes | lymphopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
| T79 | 115-127 | Disease | denotes | coagulopathy | http://purl.obolibrary.org/obo/MONDO_0001531 |
| T80 | 242-258 | Disease | denotes | thrombocytopenia | http://purl.obolibrary.org/obo/MONDO_0002049 |
| T81 | 271-290 | Disease | denotes | acute kidney injury | http://purl.obolibrary.org/obo/MONDO_0002492 |
| T82 | 284-290 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T103 | 260-263 | http://purl.obolibrary.org/obo/CLO_0054061 | denotes | 132 |
| T104 | 277-283 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T105 | 277-283 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T106 | 277-283 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T107 | 292-297 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T108 | 292-297 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T18 | 200-203 | Chemical | denotes | PTT | http://purl.obolibrary.org/obo/CHEBI_3088 |
| T19 | 298-302 | Chemical | denotes | urea | http://purl.obolibrary.org/obo/CHEBI_16199 |
| T20 | 303-311 | Chemical | denotes | nitrogen | http://purl.obolibrary.org/obo/CHEBI_25555 |
| T21 | 328-338 | Chemical | denotes | creatinine | http://purl.obolibrary.org/obo/CHEBI_16737 |
| T22 | 376-383 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T57 | 54-65 | Phenotype | denotes | lymphopenia | http://purl.obolibrary.org/obo/HP_0001888 |
| T58 | 115-127 | Phenotype | denotes | coagulopathy | http://purl.obolibrary.org/obo/HP_0003256 |
| T59 | 212-228 | Phenotype | denotes | elevated D-dimer | http://purl.obolibrary.org/obo/HP_0033106 |
| T60 | 242-258 | Phenotype | denotes | thrombocytopenia | http://purl.obolibrary.org/obo/HP_0001873 |
| T61 | 271-290 | Phenotype | denotes | acute kidney injury | http://purl.obolibrary.org/obo/HP_0001919 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T69 | 0-431 | Sentence | denotes | The patient’s laboratory results were significant for lymphopenia (WBC 3.26 k/μl, absolute lymphocyte count 0.70), coagulopathy (international normalised ratio (INR) 2.5, partial thromboplastin time (PTT) 53.9), elevated D-dimer (590 ng/mL), thrombocytopenia (132 k/μl), acute kidney injury (blood urea nitrogen (BUN) 47 mg/dL, creatinine 3.96 mg/dL), and elevated C-reactive protein initially 12.5 mg/L and increased to 26.2 mg/L. |