PMC:7253233 / 6377-8341
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7253233","sourcedb":"PMC","sourceid":"7253233","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7253233","text":"On postoperative day two, the patient suffered several episodes of left upper extremity clonic activity and worsening encephalopathy with decline in level of consciousness as evidenced by increased drowsiness and inability to follow commands. Continuous electroencephalography (EEG) confirmed three focal seizures lasting approximately 30 s each arising from the right centroparietal region (Fig. 2). Levetiracetam was initiated and both clinical and electrographic seizure activity subsided. Antibiotic regimen was broadened to Vancomycin, Meropenem, and Acyclovir for CSF coverage. MRI of the brain and cervical spine with and without contrast was remarkable only for chronic white matter hyperintensities, without acute intracranial lesions, meningeal enhancement or venous sinus thrombosis, and C5–C6 myelomalacia, respectively. Lumbar puncture was not performed due to the risk of seeding infection into neuroaxis. Given persistent high-grade fevers, worsening respiratory status requiring intubation, and recent possible exposures, a respiratory viral panel was sent in addition to separate rapid testing for COVID-19 polymerase chain reaction on postoperative day 4 and COVID-19 testing was confirmed as positive twenty-four hours later. His fibrinogen level was elevated at 631 mg/dL (normal range 200–400 mg/dL) and continued to increase to over 860 mg/dL over the following days. C-reactive protein increased from 1.7 mg/dL on prior admission to 27.3 mg/dL and remained elevated despite antimicrobial therapy. White blood cell count steadily improved over his hospitalization, and platelet count remained stable. Our patient ultimately received a tracheostomy and after 30 days of ICU stay was discharged to a long-term acute care hospital for further ventilator management.\nFig. 2 Electroencephalography. Rhythmic discharges noted in the right frontocentral/vertex region (red box) corresponding to clonic movements of the left arm (Color figure online)","divisions":[{"label":"label","span":{"begin":1785,"end":1791}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T30","span":{"begin":67,"end":87},"obj":"Body_part"},{"id":"T31","span":{"begin":570,"end":573},"obj":"Body_part"},{"id":"T32","span":{"begin":595,"end":600},"obj":"Body_part"},{"id":"T33","span":{"begin":605,"end":619},"obj":"Body_part"},{"id":"T34","span":{"begin":678,"end":690},"obj":"Body_part"},{"id":"T35","span":{"begin":745,"end":754},"obj":"Body_part"},{"id":"T36","span":{"begin":1401,"end":1408},"obj":"Body_part"},{"id":"T37","span":{"begin":1520,"end":1536},"obj":"Body_part"},{"id":"T38","span":{"begin":1532,"end":1536},"obj":"Body_part"},{"id":"T39","span":{"begin":1591,"end":1599},"obj":"Body_part"},{"id":"T40","span":{"begin":1869,"end":1875},"obj":"Body_part"},{"id":"T41","span":{"begin":1934,"end":1942},"obj":"Body_part"}],"attributes":[{"id":"A30","pred":"fma_id","subj":"T30","obj":"http://purl.org/sig/ont/fma/fma7186"},{"id":"A31","pred":"fma_id","subj":"T31","obj":"http://purl.org/sig/ont/fma/fma20935"},{"id":"A32","pred":"fma_id","subj":"T32","obj":"http://purl.org/sig/ont/fma/fma50801"},{"id":"A33","pred":"fma_id","subj":"T33","obj":"http://purl.org/sig/ont/fma/fma24138"},{"id":"A34","pred":"fma_id","subj":"T34","obj":"http://purl.org/sig/ont/fma/fma83929"},{"id":"A35","pred":"fma_id","subj":"T35","obj":"http://purl.org/sig/ont/fma/fma231572"},{"id":"A36","pred":"fma_id","subj":"T36","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A37","pred":"fma_id","subj":"T37","obj":"http://purl.org/sig/ont/fma/fma62852"},{"id":"A38","pred":"fma_id","subj":"T38","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A39","pred":"fma_id","subj":"T39","obj":"http://purl.org/sig/ont/fma/fma62851"},{"id":"A40","pred":"fma_id","subj":"T40","obj":"http://purl.org/sig/ont/fma/fma46484"},{"id":"A41","pred":"fma_id","subj":"T41","obj":"http://purl.org/sig/ont/fma/fma24896"},{"subj":"T30","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T31","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T32","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T33","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T34","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T35","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T36","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T37","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T38","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T39","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T40","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T41","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T27","span":{"begin":595,"end":600},"obj":"Body_part"},{"id":"T28","span":{"begin":678,"end":690},"obj":"Body_part"},{"id":"T29","span":{"begin":770,"end":782},"obj":"Body_part"},{"id":"T30","span":{"begin":1526,"end":1531},"obj":"Body_part"},{"id":"T31","span":{"begin":1939,"end":1942},"obj":"Body_part"}],"attributes":[{"id":"A27","pred":"uberon_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/UBERON_0000955"},{"id":"A28","pred":"uberon_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/UBERON_0002316"},{"id":"A29","pred":"uberon_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/UBERON_0006615"},{"id":"A30","pred":"uberon_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A31","pred":"uberon_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/UBERON_0001460"},{"subj":"T27","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T30","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T31","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T44","span":{"begin":118,"end":132},"obj":"Phenotype"},{"id":"T45","span":{"begin":198,"end":208},"obj":"Phenotype"},{"id":"T46","span":{"begin":299,"end":313},"obj":"Phenotype"},{"id":"T47","span":{"begin":466,"end":473},"obj":"Phenotype"},{"id":"T48","span":{"begin":678,"end":707},"obj":"Phenotype"}],"attributes":[{"id":"A44","pred":"hp_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/HP_0001298"},{"id":"A45","pred":"hp_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/HP_0002329"},{"id":"A46","pred":"hp_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/HP_0007359"},{"id":"A47","pred":"hp_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/HP_0001250"},{"id":"A48","pred":"hp_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/HP_0030890"},{"subj":"T44","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T45","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T46","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T47","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T48","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T64","span":{"begin":118,"end":132},"obj":"Disease"},{"id":"T65","span":{"begin":783,"end":793},"obj":"Disease"},{"id":"T66","span":{"begin":894,"end":903},"obj":"Disease"},{"id":"T67","span":{"begin":1115,"end":1123},"obj":"Disease"},{"id":"T68","span":{"begin":1177,"end":1185},"obj":"Disease"}],"attributes":[{"id":"A64","pred":"mondo_id","subj":"T64","obj":"http://purl.obolibrary.org/obo/MONDO_0005560"},{"id":"A65","pred":"mondo_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/MONDO_0000831"},{"id":"A66","pred":"mondo_id","subj":"T66","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A67","pred":"mondo_id","subj":"T67","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A68","pred":"mondo_id","subj":"T68","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T65","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T66","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T67","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T68","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T70","span":{"begin":78,"end":87},"obj":"http://www.ebi.ac.uk/efo/EFO_0000876"},{"id":"T71","span":{"begin":95,"end":103},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T72","span":{"begin":474,"end":482},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T73","span":{"begin":595,"end":600},"obj":"http://purl.obolibrary.org/obo/UBERON_0000955"},{"id":"T74","span":{"begin":595,"end":600},"obj":"http://www.ebi.ac.uk/efo/EFO_0000302"},{"id":"T75","span":{"begin":799,"end":801},"obj":"http://purl.obolibrary.org/obo/CLO_0002131"},{"id":"T76","span":{"begin":802,"end":804},"obj":"http://purl.obolibrary.org/obo/CLO_0002140"},{"id":"T77","span":{"begin":802,"end":804},"obj":"http://purl.obolibrary.org/obo/CLO_0051387"},{"id":"T78","span":{"begin":802,"end":804},"obj":"http://purl.obolibrary.org/obo/CLO_0051684"},{"id":"T79","span":{"begin":802,"end":804},"obj":"http://purl.obolibrary.org/obo/CLO_0051685"},{"id":"T80","span":{"begin":802,"end":804},"obj":"http://purl.obolibrary.org/obo/CLO_0051686"},{"id":"T81","span":{"begin":1038,"end":1039},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T82","span":{"begin":1103,"end":1110},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T83","span":{"begin":1186,"end":1197},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T84","span":{"begin":1526,"end":1531},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T85","span":{"begin":1532,"end":1536},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T86","span":{"begin":1655,"end":1656},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T87","span":{"begin":1718,"end":1719},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T88","span":{"begin":1939,"end":1942},"obj":"http://www.ebi.ac.uk/efo/EFO_0001410"}],"attributes":[{"subj":"T70","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T71","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T72","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T73","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T74","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T75","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T76","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T77","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T78","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T79","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T80","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T81","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T82","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T83","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T84","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T85","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T86","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T87","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T88","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T11","span":{"begin":278,"end":281},"obj":"Chemical"},{"id":"T12","span":{"begin":401,"end":414},"obj":"Chemical"},{"id":"T13","span":{"begin":529,"end":539},"obj":"Chemical"},{"id":"T14","span":{"begin":541,"end":550},"obj":"Chemical"},{"id":"T15","span":{"begin":1401,"end":1408},"obj":"Chemical"},{"id":"T16","span":{"begin":1497,"end":1510},"obj":"Chemical"}],"attributes":[{"id":"A11","pred":"chebi_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_73494"},{"id":"A12","pred":"chebi_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/CHEBI_6437"},{"id":"A13","pred":"chebi_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/CHEBI_28001"},{"id":"A14","pred":"chebi_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/CHEBI_43968"},{"id":"A15","pred":"chebi_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A16","pred":"chebi_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/CHEBI_33281"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T52","span":{"begin":0,"end":242},"obj":"Sentence"},{"id":"T53","span":{"begin":243,"end":400},"obj":"Sentence"},{"id":"T54","span":{"begin":401,"end":492},"obj":"Sentence"},{"id":"T55","span":{"begin":493,"end":583},"obj":"Sentence"},{"id":"T56","span":{"begin":584,"end":832},"obj":"Sentence"},{"id":"T57","span":{"begin":833,"end":919},"obj":"Sentence"},{"id":"T58","span":{"begin":920,"end":1244},"obj":"Sentence"},{"id":"T59","span":{"begin":1245,"end":1389},"obj":"Sentence"},{"id":"T60","span":{"begin":1390,"end":1519},"obj":"Sentence"},{"id":"T61","span":{"begin":1520,"end":1622},"obj":"Sentence"},{"id":"T62","span":{"begin":1623,"end":1784},"obj":"Sentence"},{"id":"T63","span":{"begin":1785,"end":1815},"obj":"Sentence"},{"id":"T64","span":{"begin":1816,"end":1964},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T52","pred":"source","obj":"LitCovid-sentences"},{"subj":"T53","pred":"source","obj":"LitCovid-sentences"},{"subj":"T54","pred":"source","obj":"LitCovid-sentences"},{"subj":"T55","pred":"source","obj":"LitCovid-sentences"},{"subj":"T56","pred":"source","obj":"LitCovid-sentences"},{"subj":"T57","pred":"source","obj":"LitCovid-sentences"},{"subj":"T58","pred":"source","obj":"LitCovid-sentences"},{"subj":"T59","pred":"source","obj":"LitCovid-sentences"},{"subj":"T60","pred":"source","obj":"LitCovid-sentences"},{"subj":"T61","pred":"source","obj":"LitCovid-sentences"},{"subj":"T62","pred":"source","obj":"LitCovid-sentences"},{"subj":"T63","pred":"source","obj":"LitCovid-sentences"},{"subj":"T64","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"223","span":{"begin":1884,"end":1891},"obj":"Species"},{"id":"244","span":{"begin":1390,"end":1408},"obj":"Gene"},{"id":"245","span":{"begin":1249,"end":1259},"obj":"Gene"},{"id":"246","span":{"begin":30,"end":37},"obj":"Species"},{"id":"247","span":{"begin":1627,"end":1634},"obj":"Species"},{"id":"248","span":{"begin":401,"end":414},"obj":"Chemical"},{"id":"249","span":{"begin":529,"end":539},"obj":"Chemical"},{"id":"250","span":{"begin":541,"end":550},"obj":"Chemical"},{"id":"251","span":{"begin":556,"end":565},"obj":"Chemical"},{"id":"252","span":{"begin":118,"end":132},"obj":"Disease"},{"id":"253","span":{"begin":198,"end":208},"obj":"Disease"},{"id":"254","span":{"begin":305,"end":313},"obj":"Disease"},{"id":"255","span":{"begin":466,"end":473},"obj":"Disease"},{"id":"256","span":{"begin":678,"end":707},"obj":"Disease"},{"id":"257","span":{"begin":770,"end":793},"obj":"Disease"},{"id":"258","span":{"begin":799,"end":817},"obj":"Disease"},{"id":"259","span":{"begin":894,"end":903},"obj":"Disease"},{"id":"260","span":{"begin":948,"end":954},"obj":"Disease"},{"id":"261","span":{"begin":1115,"end":1123},"obj":"Disease"},{"id":"262","span":{"begin":1177,"end":1185},"obj":"Disease"},{"id":"263","span":{"begin":1657,"end":1669},"obj":"Disease"}],"attributes":[{"id":"A223","pred":"tao:has_database_id","subj":"223","obj":"Tax:1226038"},{"id":"A244","pred":"tao:has_database_id","subj":"244","obj":"Gene:1401"},{"id":"A245","pred":"tao:has_database_id","subj":"245","obj":"Gene:2244"},{"id":"A246","pred":"tao:has_database_id","subj":"246","obj":"Tax:9606"},{"id":"A247","pred":"tao:has_database_id","subj":"247","obj":"Tax:9606"},{"id":"A248","pred":"tao:has_database_id","subj":"248","obj":"MESH:D000077287"},{"id":"A249","pred":"tao:has_database_id","subj":"249","obj":"MESH:D014640"},{"id":"A250","pred":"tao:has_database_id","subj":"250","obj":"MESH:D000077731"},{"id":"A251","pred":"tao:has_database_id","subj":"251","obj":"MESH:D000212"},{"id":"A252","pred":"tao:has_database_id","subj":"252","obj":"MESH:D001927"},{"id":"A253","pred":"tao:has_database_id","subj":"253","obj":"MESH:D006970"},{"id":"A254","pred":"tao:has_database_id","subj":"254","obj":"MESH:D012640"},{"id":"A255","pred":"tao:has_database_id","subj":"255","obj":"MESH:D012640"},{"id":"A256","pred":"tao:has_database_id","subj":"256","obj":"MESH:D056784"},{"id":"A257","pred":"tao:has_database_id","subj":"257","obj":"MESH:D012851"},{"id":"A258","pred":"tao:has_database_id","subj":"258","obj":"MESH:C537005"},{"id":"A259","pred":"tao:has_database_id","subj":"259","obj":"MESH:D007239"},{"id":"A260","pred":"tao:has_database_id","subj":"260","obj":"MESH:D005334"},{"id":"A261","pred":"tao:has_database_id","subj":"261","obj":"MESH:C000657245"},{"id":"A262","pred":"tao:has_database_id","subj":"262","obj":"MESH:C000657245"},{"subj":"223","pred":"source","obj":"LitCovid-PubTator"},{"subj":"244","pred":"source","obj":"LitCovid-PubTator"},{"subj":"245","pred":"source","obj":"LitCovid-PubTator"},{"subj":"246","pred":"source","obj":"LitCovid-PubTator"},{"subj":"247","pred":"source","obj":"LitCovid-PubTator"},{"subj":"248","pred":"source","obj":"LitCovid-PubTator"},{"subj":"249","pred":"source","obj":"LitCovid-PubTator"},{"subj":"250","pred":"source","obj":"LitCovid-PubTator"},{"subj":"251","pred":"source","obj":"LitCovid-PubTator"},{"subj":"252","pred":"source","obj":"LitCovid-PubTator"},{"subj":"253","pred":"source","obj":"LitCovid-PubTator"},{"subj":"254","pred":"source","obj":"LitCovid-PubTator"},{"subj":"255","pred":"source","obj":"LitCovid-PubTator"},{"subj":"256","pred":"source","obj":"LitCovid-PubTator"},{"subj":"257","pred":"source","obj":"LitCovid-PubTator"},{"subj":"258","pred":"source","obj":"LitCovid-PubTator"},{"subj":"259","pred":"source","obj":"LitCovid-PubTator"},{"subj":"260","pred":"source","obj":"LitCovid-PubTator"},{"subj":"261","pred":"source","obj":"LitCovid-PubTator"},{"subj":"262","pred":"source","obj":"LitCovid-PubTator"},{"subj":"263","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ec93e8","default":true},{"id":"LitCovid-PD-UBERON","color":"#93ecd6"},{"id":"LitCovid-PD-HP","color":"#ecbc93"},{"id":"LitCovid-PD-MONDO","color":"#a293ec"},{"id":"LitCovid-PD-CLO","color":"#9dec93"},{"id":"LitCovid-PD-CHEBI","color":"#ec93b7"},{"id":"LitCovid-sentences","color":"#93d1ec"},{"id":"LitCovid-PubTator","color":"#ebec93"}]}]}}