> top > docs > PMC:7252096 > spans > 92197-93300 > annotations

PMC:7252096 / 92197-93300 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1047 481-485 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T1048 486-492 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T1049 770-775 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T1050 817-823 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T1051 910-915 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T1052 955-959 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T1053 986-991 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T1054 1048-1053 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T1055 1094-1099 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T224 481-485 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T225 486-492 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T226 817-823 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T227 1048-1053 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T360 67-76 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T361 326-335 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1533 287-288 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T1534 481-485 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T1535 481-485 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T1536 770-775 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T1537 843-844 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T1538 910-915 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T1539 946-947 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T1540 955-959 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T1541 986-991 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T1542 1065-1066 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T1543 1094-1099 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T54152 365-377 Chemical denotes medetomidine http://purl.obolibrary.org/obo/CHEBI_48552
T44089 378-387 Chemical denotes midazolam http://purl.obolibrary.org/obo/CHEBI_6931
T72746 388-396 Chemical denotes fentanyl http://purl.obolibrary.org/obo/CHEBI_119915

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T69 601-610 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion
T70 743-750 http://purl.obolibrary.org/obo/GO_0004530 denotes DNase I

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T658 0-84 Sentence denotes Mice were housed in individually ventilated cages during the MHV68 infection period.
T659 85-185 Sentence denotes MHV68 stocks were grown and quantified by plaque assay as previously described (Adler et al., 2000).
T660 186-311 Sentence denotes Mice were infected intranasally (i.n.) with 5 × 10∗4 plaque forming units of MHV68 diluted in PBS in a total volume of 30 μl.
T661 312-397 Sentence denotes Prior to i.n. infection, mice were anesthetized with medetomidine–midazolam–fentanyl.
T662 398-534 Sentence denotes At the predetermined time points, mice were sacrificed by cervical dislocation and lung tissue was processed for subsequent experiments.
T663 535-762 Sentence denotes All lobes were removed, minced and transferred for mild enzymatic digestion for 20-30 min at 37°C in an enzymatic mix containing Dispase (50 caseinolytic U/mL), Collagenase (2 mg/mL), Elastase (1 mg/mL), and DNase I (30 μg/mL).
T664 763-859 Sentence denotes Single cells were harvested by straining the digested tissue suspension through a 70μm strainer.
T665 860-971 Sentence denotes After centrifugation at 300 x g for 5 min, single cells were counted, and prepared as a single cell suspension.
T666 972-1103 Sentence denotes For Drop-seq, cells were aliquoted in PBS supplemented with 0.04% of bovine serum albumin at a final concentration of 100 cells/μl.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2533 1048-1061 Gene denotes serum albumin Gene:213
2534 0-4 Species denotes Mice Tax:10090
2535 61-66 Species denotes MHV68 Tax:1440122
2536 85-90 Species denotes MHV68 Tax:1440122
2537 91-97 Species denotes stocks Tax:3724
2538 186-190 Species denotes Mice Tax:10090
2539 263-268 Species denotes MHV68 Tax:1440122
2540 337-341 Species denotes mice Tax:10090
2541 432-436 Species denotes mice Tax:10090
2542 280-283 Chemical denotes PBS MESH:D007854
2543 365-377 Chemical denotes medetomidine MESH:D020926
2544 378-387 Chemical denotes midazolam MESH:D008874
2545 388-396 Chemical denotes fentanyl MESH:D005283
2546 1010-1013 Chemical denotes PBS MESH:D007854
2547 67-76 Disease denotes infection MESH:D007239
2548 196-204 Disease denotes infected MESH:D007239
2549 326-335 Disease denotes infection MESH:D007239

2_test

Id Subject Object Predicate Lexical cue
32413319-10888635-20790571 179-183 10888635 denotes 2000