PMC:7252096 / 87134-87676
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T982 | 77-84 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
| T983 | 164-170 | Body_part | denotes | Tissue | http://purl.org/sig/ont/fma/fma9637 |
| T984 | 321-327 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T985 | 372-377 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T986 | 482-486 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T987 | 527-529 | Body_part | denotes | v1 | http://purl.org/sig/ont/fma/fma13444|http://purl.org/sig/ont/fma/fma68614 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T189 | 164-170 | Body_part | denotes | Tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T190 | 321-327 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1449 | 0-7 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | Animals |
| T1450 | 347-348 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T1451 | 372-377 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T1452 | 473-474 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T1453 | 482-486 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T124 | 237-239 | Chemical | denotes | IV | http://purl.obolibrary.org/obo/CHEBI_74327 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T56 | 264-271 | http://purl.obolibrary.org/obo/GO_0004530 | denotes | DNase I |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T620 | 0-163 | Sentence | denotes | Animals were perfused with 0.5 L of PBS/kg immediately following euthanasia, tissues were isolated and placed in RPMI + 10% FBS and kept on ice until dissociation. |
| T621 | 164-311 | Sentence | denotes | Tissue sections were digested by mincing and incubating with collagenase IV (Life Technologies) and DNase I (Roche) at 37°C for 1 h with agitation. |
| T622 | 312-542 | Sentence | denotes | Digested tissue was passed through a 100 μm metal strainer, cells were pelleted by centrifugation at 300 g, rinsed with RPMI + 10% FBS, counted, and prepared as a single cell suspension for scRNA-seq using Seq-Well v1 (see below). |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T20 | 301-310 | Phenotype | denotes | agitation | http://purl.obolibrary.org/obo/HP_0000713 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 2430 | 36-39 | Chemical | denotes | PBS | MESH:D007854 |
| 2431 | 113-117 | Chemical | denotes | RPMI | |
| 2432 | 432-436 | Chemical | denotes | RPMI | |
| 2433 | 301-310 | Disease | denotes | agitation | MESH:D011595 |