PMC:7252096 / 2225-3592
Annnotations
{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7252096","sourcedb":"PMC","sourceid":"7252096","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7252096","text":"Human coronaviruses (CoVs) are single-stranded positive-sense RNA viruses that can cause mild to severe respiratory disease (Fung and Liu, 2019). Over the past two decades, zoonotic transmission events have led to the emergence of two highly pathogenic CoVs: severe acute respiratory syndrome (SARS)-CoV and Middle East respiratory syndrome (MERS)-CoV. SARS-CoV-2, which causes the disease known as COVID-19, was first reported in late 2019 (Coronaviridae Study Group of the International Committee on Taxonomy of V., 2020, Lu et al., 2020, Paules et al., 2020). COVID-19 is characterized by pneumonia, fever, cough, and occasional diarrhea (Guan et al., 2020, Holshue et al., 2020, Huang et al., 2020), and SARS-CoV-2 RNA has been reliably detected in nasopharyngeal swabs, sputum, and stool samples (Wang et al., 2020, Wölfel et al., 2020, Zou et al., 2020). As of April 19, 2020, SARS-CoV-2 continues to spread worldwide, and there are over 2,401,379 confirmed cases, 165,044 deaths, and 623,903 recovered individuals in 185 countries and regions (Dong et al., 2020a). Early models of COVID-19 transmission dynamics estimate one infectious individual infects slightly over two individuals; travel restrictions reduce that spread to one individual, although these figures might evolve as more accurate epidemiological data become available (Kucharski et al., 2020).","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T40451","span":{"begin":62,"end":65},"obj":"Body_part"},{"id":"T12346","span":{"begin":719,"end":722},"obj":"Body_part"},{"id":"T41750","span":{"begin":775,"end":781},"obj":"Body_part"},{"id":"T67748","span":{"begin":787,"end":792},"obj":"Body_part"}],"attributes":[{"id":"A48241","pred":"fma_id","subj":"T40451","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A18593","pred":"fma_id","subj":"T12346","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A71665","pred":"fma_id","subj":"T41750","obj":"http://purl.org/sig/ont/fma/fma312401"},{"id":"A61280","pred":"fma_id","subj":"T67748","obj":"http://purl.org/sig/ont/fma/fma64183"},{"subj":"T40451","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T12346","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T41750","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T67748","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T10","span":{"begin":775,"end":781},"obj":"Body_part"},{"id":"T11","span":{"begin":787,"end":792},"obj":"Body_part"}],"attributes":[{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0007311"},{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/UBERON_0001988"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T23","span":{"begin":104,"end":123},"obj":"Disease"},{"id":"T24","span":{"begin":259,"end":292},"obj":"Disease"},{"id":"T25","span":{"begin":294,"end":298},"obj":"Disease"},{"id":"T26","span":{"begin":353,"end":361},"obj":"Disease"},{"id":"T27","span":{"begin":353,"end":357},"obj":"Disease"},{"id":"T28","span":{"begin":399,"end":407},"obj":"Disease"},{"id":"T29","span":{"begin":563,"end":571},"obj":"Disease"},{"id":"T30","span":{"begin":592,"end":601},"obj":"Disease"},{"id":"T31","span":{"begin":632,"end":640},"obj":"Disease"},{"id":"T32","span":{"begin":708,"end":716},"obj":"Disease"},{"id":"T33","span":{"begin":708,"end":712},"obj":"Disease"},{"id":"T34","span":{"begin":883,"end":891},"obj":"Disease"},{"id":"T35","span":{"begin":883,"end":887},"obj":"Disease"},{"id":"T36","span":{"begin":1088,"end":1096},"obj":"Disease"},{"id":"T37","span":{"begin":1132,"end":1142},"obj":"Disease"}],"attributes":[{"id":"A23","pred":"mondo_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/MONDO_0005087"},{"id":"A24","pred":"mondo_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A25","pred":"mondo_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A26","pred":"mondo_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A27","pred":"mondo_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A28","pred":"mondo_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A29","pred":"mondo_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A30","pred":"mondo_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A31","pred":"mondo_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/MONDO_0001673"},{"id":"A32","pred":"mondo_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A33","pred":"mondo_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A34","pred":"mondo_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A35","pred":"mondo_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A36","pred":"mondo_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A37","pred":"mondo_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T23","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T24","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T25","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T26","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T27","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T30","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T31","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T32","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T33","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T34","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T35","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T36","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T37","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T39785","span":{"begin":0,"end":5},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T31475","span":{"begin":66,"end":73},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T21591","span":{"begin":723,"end":726},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"}],"attributes":[{"subj":"T39785","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T31475","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T21591","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T10","span":{"begin":524,"end":526},"obj":"Chemical"}],"attributes":[{"id":"A10","pred":"chebi_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/CHEBI_33382"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T20","span":{"begin":0,"end":145},"obj":"Sentence"},{"id":"T21","span":{"begin":146,"end":352},"obj":"Sentence"},{"id":"T22","span":{"begin":353,"end":562},"obj":"Sentence"},{"id":"T23","span":{"begin":563,"end":860},"obj":"Sentence"},{"id":"T24","span":{"begin":861,"end":1071},"obj":"Sentence"},{"id":"T25","span":{"begin":1072,"end":1367},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T20","pred":"source","obj":"LitCovid-sentences"},{"subj":"T21","pred":"source","obj":"LitCovid-sentences"},{"subj":"T22","pred":"source","obj":"LitCovid-sentences"},{"subj":"T23","pred":"source","obj":"LitCovid-sentences"},{"subj":"T24","pred":"source","obj":"LitCovid-sentences"},{"subj":"T25","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T1","span":{"begin":592,"end":601},"obj":"Phenotype"},{"id":"T2","span":{"begin":603,"end":608},"obj":"Phenotype"},{"id":"T3","span":{"begin":610,"end":615},"obj":"Phenotype"},{"id":"T4","span":{"begin":632,"end":640},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0002014"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"128","span":{"begin":0,"end":5},"obj":"Species"},{"id":"129","span":{"begin":6,"end":19},"obj":"Species"},{"id":"130","span":{"begin":21,"end":25},"obj":"Species"},{"id":"131","span":{"begin":253,"end":257},"obj":"Species"},{"id":"132","span":{"begin":259,"end":303},"obj":"Species"},{"id":"133","span":{"begin":342,"end":351},"obj":"Species"},{"id":"134","span":{"begin":353,"end":363},"obj":"Species"},{"id":"135","span":{"begin":708,"end":718},"obj":"Species"},{"id":"136","span":{"begin":883,"end":893},"obj":"Species"},{"id":"137","span":{"begin":104,"end":123},"obj":"Disease"},{"id":"138","span":{"begin":173,"end":181},"obj":"Disease"},{"id":"139","span":{"begin":308,"end":340},"obj":"Disease"},{"id":"140","span":{"begin":399,"end":407},"obj":"Disease"},{"id":"141","span":{"begin":563,"end":571},"obj":"Disease"},{"id":"142","span":{"begin":592,"end":601},"obj":"Disease"},{"id":"143","span":{"begin":603,"end":608},"obj":"Disease"},{"id":"144","span":{"begin":610,"end":615},"obj":"Disease"},{"id":"145","span":{"begin":632,"end":640},"obj":"Disease"},{"id":"146","span":{"begin":979,"end":985},"obj":"Disease"},{"id":"147","span":{"begin":1088,"end":1096},"obj":"Disease"}],"attributes":[{"id":"A128","pred":"tao:has_database_id","subj":"128","obj":"Tax:9606"},{"id":"A129","pred":"tao:has_database_id","subj":"129","obj":"Tax:11118"},{"id":"A130","pred":"tao:has_database_id","subj":"130","obj":"Tax:11118"},{"id":"A131","pred":"tao:has_database_id","subj":"131","obj":"Tax:11118"},{"id":"A132","pred":"tao:has_database_id","subj":"132","obj":"Tax:694009"},{"id":"A133","pred":"tao:has_database_id","subj":"133","obj":"Tax:1335626"},{"id":"A134","pred":"tao:has_database_id","subj":"134","obj":"Tax:2697049"},{"id":"A135","pred":"tao:has_database_id","subj":"135","obj":"Tax:2697049"},{"id":"A136","pred":"tao:has_database_id","subj":"136","obj":"Tax:2697049"},{"id":"A137","pred":"tao:has_database_id","subj":"137","obj":"MESH:D012140"},{"id":"A138","pred":"tao:has_database_id","subj":"138","obj":"MESH:D015047"},{"id":"A139","pred":"tao:has_database_id","subj":"139","obj":"MESH:D018352"},{"id":"A140","pred":"tao:has_database_id","subj":"140","obj":"MESH:C000657245"},{"id":"A141","pred":"tao:has_database_id","subj":"141","obj":"MESH:C000657245"},{"id":"A142","pred":"tao:has_database_id","subj":"142","obj":"MESH:D011014"},{"id":"A143","pred":"tao:has_database_id","subj":"143","obj":"MESH:D005334"},{"id":"A144","pred":"tao:has_database_id","subj":"144","obj":"MESH:D003371"},{"id":"A145","pred":"tao:has_database_id","subj":"145","obj":"MESH:D003967"},{"id":"A146","pred":"tao:has_database_id","subj":"146","obj":"MESH:D003643"},{"id":"A147","pred":"tao:has_database_id","subj":"147","obj":"MESH:C000657245"},{"subj":"128","pred":"source","obj":"LitCovid-PubTator"},{"subj":"129","pred":"source","obj":"LitCovid-PubTator"},{"subj":"130","pred":"source","obj":"LitCovid-PubTator"},{"subj":"131","pred":"source","obj":"LitCovid-PubTator"},{"subj":"132","pred":"source","obj":"LitCovid-PubTator"},{"subj":"133","pred":"source","obj":"LitCovid-PubTator"},{"subj":"134","pred":"source","obj":"LitCovid-PubTator"},{"subj":"135","pred":"source","obj":"LitCovid-PubTator"},{"subj":"136","pred":"source","obj":"LitCovid-PubTator"},{"subj":"137","pred":"source","obj":"LitCovid-PubTator"},{"subj":"138","pred":"source","obj":"LitCovid-PubTator"},{"subj":"139","pred":"source","obj":"LitCovid-PubTator"},{"subj":"140","pred":"source","obj":"LitCovid-PubTator"},{"subj":"141","pred":"source","obj":"LitCovid-PubTator"},{"subj":"142","pred":"source","obj":"LitCovid-PubTator"},{"subj":"143","pred":"source","obj":"LitCovid-PubTator"},{"subj":"144","pred":"source","obj":"LitCovid-PubTator"},{"subj":"145","pred":"source","obj":"LitCovid-PubTator"},{"subj":"146","pred":"source","obj":"LitCovid-PubTator"},{"subj":"147","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"2_test","denotations":[{"id":"32413319-31226023-20790397","span":{"begin":139,"end":143},"obj":"31226023"},{"id":"32413319-32007145-20790398","span":{"begin":535,"end":539},"obj":"32007145"},{"id":"32413319-32004427-20790399","span":{"begin":677,"end":681},"obj":"32004427"},{"id":"32413319-31986264-20790400","span":{"begin":697,"end":701},"obj":"31986264"},{"id":"32413319-32074444-20790401","span":{"begin":854,"end":858},"obj":"32074444"}],"attributes":[{"subj":"32413319-31226023-20790397","pred":"source","obj":"2_test"},{"subj":"32413319-32007145-20790398","pred":"source","obj":"2_test"},{"subj":"32413319-32004427-20790399","pred":"source","obj":"2_test"},{"subj":"32413319-31986264-20790400","pred":"source","obj":"2_test"},{"subj":"32413319-32074444-20790401","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#eccb93","default":true},{"id":"LitCovid-PD-UBERON","color":"#b193ec"},{"id":"LitCovid-PD-MONDO","color":"#93ec97"},{"id":"LitCovid-PD-CLO","color":"#ec93a8"},{"id":"LitCovid-PD-CHEBI","color":"#93c2ec"},{"id":"LitCovid-sentences","color":"#dcec93"},{"id":"LitCovid-PD-HP","color":"#e193ec"},{"id":"LitCovid-PubTator","color":"#93ecc7"},{"id":"2_test","color":"#ecad93"}]}]}}