PMC:7252096 / 107455-107768 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T65 161-166 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T66 303-307 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T105 48-53 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T106 161-166 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T107 214-219 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T108 270-274 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T109 303-312 http://purl.obolibrary.org/obo/CL_0000000 denotes cell type

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T25822 106-109 Chemical denotes PCA http://purl.obolibrary.org/obo/CHEBI_36751|http://purl.obolibrary.org/obo/CHEBI_62248

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T771 0-313 Sentence denotes We annotated clusters based on highly expressed genes, then sub-clusters were characterized by performing PCA dimensionality reduction and clustering over those cells alone, and annotated based on highly expressed genes found via one-versus-rest differential expression test (Wilcoxon) within the major cell type.