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PMC:7247521 / 29019-29544 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
446 208-223 Gene denotes SX1, O1, X2, X1
447 286-290 Gene denotes Mpro Gene:8673700
448 306-310 Gene denotes RdRp Gene:43740578
449 329-333 Gene denotes RdRp Gene:43740578
450 355-363 Gene denotes Helicase Gene:164045
451 382-390 Gene denotes Helicase Gene:164045
452 292-297 Gene denotes PLpro Gene:43740578
453 19-27 Disease denotes COVID-19 MESH:C000657245

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T373 19-27 SP_7 denotes COVID-19
T374 130-139 CHEBI:36357;CHEBI:36357 denotes compounds
T375 299-304 PR:000000125 denotes nsp12
T376 322-327 PR:000000125 denotes nsp12
T377 348-353 PR:000000125 denotes nsp13
T378 364-372 SO:0000346 denotes ADP site
T379 375-380 PR:000000125 denotes nsp13
T380 402-407 PR:000000125 denotes nsp14
T381 416-421 PR:000000125 denotes nsp14
T382 434-439 PR:000000125 denotes nsp15
T383 460-465 PR:000000125 denotes nsp16
T384 480-489 PG_4 denotes N protein
T385 500-509 PG_2 denotes E protein
T386 511-514 CHEBI:24870;CHEBI:24870 denotes ion

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T95 276-284 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T96 316-319 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T97 342-345 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T98 409-413 Body_part denotes ExoN http://purl.org/sig/ont/fma/fma84120
T99 482-489 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T100 502-509 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T60 19-27 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T247 141-143 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T248 204-206 http://purl.obolibrary.org/obo/CLO_0008933 denotes S5
T249 229-232 http://purl.obolibrary.org/obo/CLO_0007875 denotes MS1
T250 229-232 http://purl.obolibrary.org/obo/CLO_0052410 denotes MS1

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T192 4-15 Chemical denotes application http://purl.obolibrary.org/obo/CHEBI_33232
T193 200-202 Chemical denotes M3 http://purl.obolibrary.org/obo/CHEBI_51083|http://purl.obolibrary.org/obo/CHEBI_53453
T195 204-206 Chemical denotes S5 http://purl.obolibrary.org/obo/CHEBI_29386
T196 225-227 Chemical denotes O2 http://purl.obolibrary.org/obo/CHEBI_15379
T197 276-284 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T198 364-367 Chemical denotes ADP http://purl.obolibrary.org/obo/CHEBI_16761|http://purl.obolibrary.org/obo/CHEBI_456216|http://purl.obolibrary.org/obo/CHEBI_73342
T201 482-489 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T202 502-509 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T203 511-514 Chemical denotes ion http://purl.obolibrary.org/obo/CHEBI_24870

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T100 511-522 http://purl.obolibrary.org/obo/GO_0022831 denotes ion channel

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T216 0-525 Sentence denotes The application of COVID-19 docking server and Discovery Studio software elucidated the interactions between the 20 lead-likeness compounds (S1, W5, MX17, MX16, W11, M5, XO1, MXO1, SO1, WO1, X4, MX8, M3, S5, SX1, O1, X2, X1, O2, MS1) and the 10 nonstructural and 2 structural proteins (Mpro, PLpro, nsp12 [RdRp with RNA], nsp12 [RdRp without RNA], nsp13 [Helicase ADP site], nsp13 [Helicase NCB site], nsp14 [ExoN], nsp14 [N7-MTase], nsp15 [endoribonuclease], nsp16 [2′-O-MTase], N protein NCB site, E protein [ion channel]).

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T3 186-189 GlycoEpitope denotes WO1 http://www.glycoepitope.jp/epitopes/AN0690