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PMC:7247521 / 11511-12238 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
190 5-9 Gene denotes ACE2 Gene:59272
191 14-19 Gene denotes CD147 Gene:682
198 119-123 Gene denotes ACE2 Gene:59272
199 128-133 Gene denotes CD147 Gene:682
200 261-265 Gene denotes ACE2 Gene:59272
201 270-275 Gene denotes CD147 Gene:682
202 493-497 Gene denotes ACE2 Gene:59272
203 385-394 Disease denotes pneumonia MESH:D011014

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T134 5-9 G_3;PG_10;PR:000003622 denotes ACE2
T135 14-19 PR:000001324 denotes CD147
T136 20-30 GO:0010467 denotes expression
T137 38-45 UBERON:0000479 denotes tissues
T138 53-63 GO:0010467 denotes expression
T139 64-69 SO:0000704 denotes genes
T140 88-98 GO:0010467 denotes expression
T141 119-123 G_3;PG_10;PR:000003622 denotes ACE2
T142 128-133 PR:000001324 denotes CD147
T143 141-148 UBERON:0000479 denotes tissues
T144 176-183 UBERON:0000479 denotes tissues
T145 241-251 GO:0010467 denotes expression
T146 252-257 SO:0000704 denotes genes
T147 261-265 G_3;PG_10;PR:000003622 denotes ACE2
T148 270-275 PR:000001324 denotes CD147
T149 406-411 SO:0000704 denotes genes
T150 473-483 GO:0010467 denotes expression
T151 484-489 SO:0000704 denotes genes
T152 493-497 G_3;PG_10;PR:000003622 denotes ACE2
T153 501-508 UBERON:0001155;CL:0011108 denotes colonic
T154 509-519 CL:0011108;UBERON:0000483 denotes epithelial
T155 520-525 CL:0011108 denotes cells
T156 551-555 GO:0018995 denotes host

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T30 38-45 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T31 141-148 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T32 176-183 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T33 509-525 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T34 520-525 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T35 556-564 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T36 701-709 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T38 385-394 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T87 64-69 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T88 150-151 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T89 252-257 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T90 406-411 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T91 484-489 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T92 501-508 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colonic
T93 509-519 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T94 520-525 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T61 556-564 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T62 701-709 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T10 385-394 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T70 0-69 Sentence denotes 2.7 ACE2 and CD147 expression across tissues and co-expression genes
T71 70-221 Sentence denotes To understand the expression and distribution of ACE2 and CD147 across tissues, a radar plot including 53 tissues was performed through COXPRESdb [24].
T72 222-316 Sentence denotes And the top 200 co-expression genes of ACE2 and CD147 (P < 1E-16) were obtained, respectively.
T73 317-456 Sentence denotes Then, text mining method from the literature was used to screen for pneumonia-associated genes through COREMINE (http://www.coremine.com/).
T74 457-600 Sentence denotes In addition, co-expression genes of ACE2 in colonic epithelial cells [25] and HCoV-associated host proteins with references [26] were obtained.
T75 601-727 Sentence denotes Finally, we performed UpsetView analysis (http://www.ehbio.com/ImageGP/) between these five sets of proteins and QFPD targets.

2_test

Id Subject Object Predicate Lexical cue
32554251-30462320-6393502 217-219 30462320 denotes 24