PMC:7243778 / 26780-27660
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
662 | 473-478 | Gene | denotes | spike | Gene:43740568 |
663 | 713-718 | Gene | denotes | spike | Gene:43740568 |
664 | 30-38 | Species | denotes | SARS-CoV | Tax:694009 |
665 | 43-53 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
666 | 273-283 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
667 | 299-307 | Species | denotes | SARS-CoV | Tax:694009 |
668 | 801-811 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
669 | 855-863 | Species | denotes | SARS-CoV | Tax:694009 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T119 | 247-255 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
T120 | 409-417 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
T121 | 479-487 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T122 | 648-656 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
T123 | 719-727 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T124 | 767-775 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T115 | 30-38 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T116 | 43-51 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T117 | 273-281 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T118 | 299-307 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T119 | 801-809 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T120 | 855-863 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T325 | 105-108 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T326 | 386-387 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T327 | 745-746 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T153 | 225-232 | Chemical | denotes | epitope | http://purl.obolibrary.org/obo/CHEBI_53000 |
T154 | 256-263 | Chemical | denotes | epitope | http://purl.obolibrary.org/obo/CHEBI_53000 |
T155 | 418-425 | Chemical | denotes | epitope | http://purl.obolibrary.org/obo/CHEBI_53000 |
T156 | 479-487 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T157 | 580-587 | Chemical | denotes | epitope | http://purl.obolibrary.org/obo/CHEBI_53000 |
T158 | 719-727 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T208 | 0-92 | Sentence | denotes | The difference between RBD of SARS-CoV and SARS-CoV-2 is located at the C-terminus residues. |
T209 | 93-161 | Sentence | denotes | This change has an important impact on the cross-reactivity of nAbs. |
T210 | 162-242 | Sentence | denotes | This difference was observed using bioinformatic approaches of epitope analysis. |
T211 | 243-308 | Sentence | denotes | The antibody epitope score of SARS-CoV-2 is higher than SARS-CoV. |
T212 | 309-512 | Sentence | denotes | Moreover, compared with the conserved regions, the non-conserved regions had a significantly higher antibody epitope score indicating that non-conserved regions of spike proteins are much more antigenic. |
T213 | 513-694 | Sentence | denotes | The non-conserved regions also showed significantly higher surface epitope accessibility scores suggesting an easier accessibility for antibody recognition of non-conserved regions. |
T214 | 695-785 | Sentence | denotes | The divergence of spike proteins is considered as a major change in the antibody epitopes. |
T215 | 786-880 | Sentence | denotes | The search for SARS-CoV-2 requires more effort than simply screening SARS-CoV antibodies [95]. |