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PMC:7243778 / 26780-27660 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
662 473-478 Gene denotes spike Gene:43740568
663 713-718 Gene denotes spike Gene:43740568
664 30-38 Species denotes SARS-CoV Tax:694009
665 43-53 Species denotes SARS-CoV-2 Tax:2697049
666 273-283 Species denotes SARS-CoV-2 Tax:2697049
667 299-307 Species denotes SARS-CoV Tax:694009
668 801-811 Species denotes SARS-CoV-2 Tax:2697049
669 855-863 Species denotes SARS-CoV Tax:694009

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T119 247-255 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T120 409-417 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T121 479-487 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T122 648-656 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T123 719-727 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T124 767-775 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T115 30-38 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T116 43-51 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T117 273-281 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T118 299-307 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T119 801-809 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T120 855-863 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T325 105-108 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T326 386-387 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T327 745-746 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T153 225-232 Chemical denotes epitope http://purl.obolibrary.org/obo/CHEBI_53000
T154 256-263 Chemical denotes epitope http://purl.obolibrary.org/obo/CHEBI_53000
T155 418-425 Chemical denotes epitope http://purl.obolibrary.org/obo/CHEBI_53000
T156 479-487 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T157 580-587 Chemical denotes epitope http://purl.obolibrary.org/obo/CHEBI_53000
T158 719-727 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T208 0-92 Sentence denotes The difference between RBD of SARS-CoV and SARS-CoV-2 is located at the C-terminus residues.
T209 93-161 Sentence denotes This change has an important impact on the cross-reactivity of nAbs.
T210 162-242 Sentence denotes This difference was observed using bioinformatic approaches of epitope analysis.
T211 243-308 Sentence denotes The antibody epitope score of SARS-CoV-2 is higher than SARS-CoV.
T212 309-512 Sentence denotes Moreover, compared with the conserved regions, the non-conserved regions had a significantly higher antibody epitope score indicating that non-conserved regions of spike proteins are much more antigenic.
T213 513-694 Sentence denotes The non-conserved regions also showed significantly higher surface epitope accessibility scores suggesting an easier accessibility for antibody recognition of non-conserved regions.
T214 695-785 Sentence denotes The divergence of spike proteins is considered as a major change in the antibody epitopes.
T215 786-880 Sentence denotes The search for SARS-CoV-2 requires more effort than simply screening SARS-CoV antibodies [95].