> top > docs > PMC:7243778 > spans > 25925-26779 > annotations

PMC:7243778 / 25925-26779 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
639 777-778 Gene denotes S Gene:43740568
640 350-351 Gene denotes S Gene:43740568
641 46-54 Species denotes SARS-CoV Tax:694009
642 59-67 Species denotes MERS-CoV Tax:1335626
643 192-200 Species denotes SARS-CoV Tax:694009
644 201-209 Species denotes patients Tax:9606
645 245-255 Species denotes SARS-CoV-2 Tax:2697049
646 297-305 Species denotes SARS-CoV Tax:694009
647 339-349 Species denotes SARS-CoV-2 Tax:2697049
648 456-464 Species denotes SARS-CoV Tax:694009
649 498-508 Species denotes SARS-CoV-2 Tax:2697049
650 674-684 Species denotes SARS-CoV-2 Tax:2697049
651 479-487 Species denotes MERS-CoV Tax:1335626
652 120-140 Disease denotes SARS-CoV-2 infection MESH:C000657245
653 148-156 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T112 32-40 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T113 167-172 Body_part denotes Serum http://purl.org/sig/ont/fma/fma63083
T114 352-359 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T115 536-544 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T116 576-586 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T117 715-725 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T118 779-786 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 167-172 Body_part denotes Serum http://purl.obolibrary.org/obo/UBERON_0001977

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T102 46-54 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T103 120-128 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T104 131-140 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T105 148-156 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T106 192-200 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T107 245-253 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T108 297-305 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T109 339-347 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T110 456-464 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T111 498-506 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T112 674-682 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T113 759-762 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T321 105-111 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T322 736-738 http://purl.obolibrary.org/obo/CLO_0054055 denotes 71
T323 788-790 http://purl.obolibrary.org/obo/CLO_0001627 denotes aa
T324 850-852 http://purl.obolibrary.org/obo/CLO_0001527 denotes 94

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T143 32-40 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T144 352-359 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T145 545-552 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T146 576-586 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T147 576-581 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T148 582-586 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T149 715-725 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T150 715-720 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T151 721-725 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T152 779-786 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T202 0-166 Sentence denotes Due to the high similarity of S proteins from SARS-CoV and MERS-CoV [73], their specific cross-nAbs were tested against SARS-CoV-2 infection in the COVID-19 outbreak.
T203 167-311 Sentence denotes Serum Abs from recovered SARS-CoV patients could efficiently cross-neutralize SARS-CoV-2 but with lower efficiency as compared to SARS-CoV [92].
T204 312-395 Sentence denotes Cross-reactive Abs against SARS-CoV-2 S protein mostly target non-RBD regions [93].
T205 396-571 Sentence denotes Using simulation technique, the binding of five Abs against SARS-CoV, six Abs anti-MERS-CoV to RBD of SARS-CoV-2 was predicted with Rosetta antibody-antigen docking protocols.
T206 572-685 Sentence denotes The amino acid position 445–449 (VGGNY) and 470–486 (TEIYQAGSTPCNGVEGF) were found to be conserved in SARS-CoV-2.
T207 686-854 Sentence denotes Moreover, in addition to the amino acid positions 71–77 (GTNGTKR) in the NTD region of the S protein, aa 445–449 and 470–486 are potential for further development [94].

2_test

Id Subject Object Predicate Lexical cue
32450171-32015507-66454511 69-71 32015507 denotes 73