PMC:7243778 / 21888-22770
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 540 | 10-20 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 541 | 21-32 | Species | denotes | coronavirus | Tax:11118 |
| 542 | 256-266 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 543 | 296-304 | Species | denotes | SARS-CoV | Tax:694009 |
| 544 | 331-344 | Species | denotes | coronaviruses | Tax:11118 |
| 545 | 349-353 | Species | denotes | CoVs | Tax:11118 |
| 546 | 439-455 | Species | denotes | beta coronavirus | Tax:694002 |
| 547 | 471-481 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 548 | 535-543 | Species | denotes | SARS-CoV | Tax:694009 |
| 549 | 597-605 | Species | denotes | patients | Tax:9606 |
| 550 | 623-640 | Species | denotes | influenza viruses | Tax:11308 |
| 551 | 642-650 | Species | denotes | SARS-CoV | Tax:694009 |
| 552 | 655-665 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 553 | 550-558 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T94 | 676-684 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T72 | 10-18 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T73 | 256-264 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T74 | 296-304 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T75 | 321-325 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T76 | 471-479 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T77 | 535-543 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T78 | 550-558 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T79 | 623-632 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T80 | 642-650 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T81 | 655-663 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T278 | 96-97 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T279 | 309-312 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T280 | 430-431 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T281 | 562-563 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T282 | 633-640 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T283 | 673-674 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T284 | 794-804 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activators |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T128 | 346-348 | Chemical | denotes | SL | http://purl.obolibrary.org/obo/CHEBI_74815 |
| T129 | 439-443 | Chemical | denotes | beta | http://purl.obolibrary.org/obo/CHEBI_10545 |
| T130 | 751-761 | Chemical | denotes | interferon | http://purl.obolibrary.org/obo/CHEBI_52999 |
| T131 | 762-773 | Chemical | denotes | antagonists | http://purl.obolibrary.org/obo/CHEBI_48706 |
| T132 | 842-851 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 676-690 | Phenotype | denotes | cytokine storm | http://purl.obolibrary.org/obo/HP_0033041 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T170 | 0-230 | Sentence | denotes | The novel SARS-CoV-2 coronavirus, first appeared in Wuhan, China, in December 2019, is creating a pandemic over the world with the number of confirmed cases reached 3,529,408, of which 248,025 were dead up to the 4th May 2020 [1]. |
| T171 | 231-406 | Sentence | denotes | Phylogenetic analysis of SARS-CoV-2 demonstrated similarity with SARS-CoV and bat-derived SARS-like coronaviruses (SL-CoVs) with 79.6% and 88% sequence identity, respectively. |
| T172 | 407-470 | Sentence | denotes | They belong to lineage B of the beta coronavirus genus [73,74]. |
| T173 | 471-549 | Sentence | denotes | SARS-CoV-2 seems to be more contagious but less pathogenic than SARS-CoV [75]. |
| T174 | 550-606 | Sentence | denotes | COVID-19 is a self-limiting disease in >80% of patients. |
| T175 | 607-717 | Sentence | denotes | Same as Spanish influenza viruses, SARS-CoV and SARS-CoV-2 induce a “cytokine storm” but to different degrees. |
| T176 | 718-882 | Sentence | denotes | The difference of some conserved interferon antagonists and of inflammasome activators explains their abilities to modulate antiviral and proinflammatory responses. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32450171-32015507-66454498 | 463-465 | 32015507 | denotes | 73 |
| 32450171-32007145-66454499 | 466-468 | 32007145 | denotes | 74 |
| 32450171-32190290-66454500 | 545-547 | 32190290 | denotes | 75 |