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PMC:7243768 / 62296-63897 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2381 1238-1243 Gene denotes IFN-β Gene:3439
2382 280-288 Species denotes SARS-CoV Tax:694009
2383 365-373 Species denotes SARS-CoV Tax:694009
2384 579-587 Species denotes SARS-CoV Tax:694009
2385 848-856 Species denotes SARS-CoV Tax:694009
2386 858-866 Species denotes MERS-CoV Tax:1335626
2387 868-878 Species denotes SARS-CoV-2 Tax:2697049
2388 950-958 Species denotes MERS-CoV Tax:1335626
2389 960-970 Species denotes SARS-CoV-2 Tax:2697049
2390 1135-1143 Species denotes MERS-CoV Tax:1335626
2391 1244-1252 Species denotes MERS-CoV Tax:1335626
2392 1411-1421 Species denotes SARS-CoV-2 Tax:2697049
2393 90-98 Species denotes SARS-CoV Tax:694009
2394 459-467 Species denotes SARS-CoV Tax:694009
2395 80-89 Chemical denotes Ribavirin MESH:D012254
2396 110-120 Chemical denotes nucleoside MESH:D009705
2397 270-279 Chemical denotes Lopinavir MESH:D061466
2398 355-364 Chemical denotes Ritonavir MESH:D019438
2399 440-458 Chemical denotes Methylprednisolone MESH:D008775
2400 674-692 Chemical denotes Methylprednisolone MESH:D008775
2401 719-733 Chemical denotes hydrocortisone MESH:D006854
2402 766-784 Chemical denotes methylprednisolone MESH:D008775
2403 930-949 Chemical denotes Lopinavir/ritonavir MESH:C558899
2404 1214-1233 Chemical denotes Lopinavir/ritonavir MESH:C558899
2405 1392-1410 Chemical denotes Hydroxychloroquine MESH:D006886
2406 169-175 Disease denotes Anemia MESH:D000740
2407 177-189 Disease denotes hypocalcemia MESH:D006996
2408 191-205 Disease denotes hypomagnesemia MESH:C537153
2409 248-259 Disease denotes bradycardia MESH:D001919
2410 309-317 Disease denotes Diarrhea MESH:D003967
2411 319-325 Disease denotes nausea MESH:D009325
2412 327-335 Disease denotes vomiting MESH:D014839
2413 337-345 Disease denotes headache MESH:D006261
2414 394-402 Disease denotes Diarrhea MESH:D003967
2415 404-410 Disease denotes nausea MESH:D009325
2416 412-420 Disease denotes vomiting MESH:D014839
2417 422-430 Disease denotes headache MESH:D006261
2418 506-514 Disease denotes diabetes MESH:D003920
2419 516-534 Disease denotes avascular necrosis MESH:D010020
2420 536-548 Disease denotes osteoporosis MESH:D010024
2421 622-635 Disease denotes Aspergillosis MESH:D001228
2422 1022-1031 Disease denotes pneumonia MESH:D011014
2423 1042-1061 Disease denotes SARS-CoV-2 Diarrhea MESH:C000657245
2424 1063-1069 Disease denotes nausea MESH:D009325
2425 1071-1079 Disease denotes vomiting MESH:D014839
2426 1081-1089 Disease denotes headache MESH:D006261
2427 1167-1175 Disease denotes Diarrhea MESH:D003967
2428 1177-1183 Disease denotes nausea MESH:D009325
2429 1185-1193 Disease denotes vomiting MESH:D014839
2430 1195-1203 Disease denotes headache MESH:D006261
2431 1296-1304 Disease denotes necrosis MESH:D009336
2432 1341-1349 Disease denotes Diarrhea MESH:D003967
2433 1351-1357 Disease denotes nausea MESH:D009325
2434 1359-1367 Disease denotes vomiting MESH:D014839
2435 1369-1377 Disease denotes headache MESH:D006261
2436 1423-1430 Disease denotes Malaria MESH:D008288
2437 1534-1556 Disease denotes infected cell Diarrhea MESH:D003967
2438 1558-1564 Disease denotes nausea MESH:D009325
2439 1566-1574 Disease denotes vomiting MESH:D014839
2440 1576-1584 Disease denotes headache MESH:D006261
2441 1586-1595 Disease denotes dizziness MESH:D004244

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T519 801-805 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T520 841-847 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T521 1153-1156 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T522 1308-1313 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T523 1333-1340 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T524 1452-1460 Body_part denotes endosome http://purl.org/sig/ont/fma/fma67180
T525 1543-1547 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T260 801-805 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T718 90-98 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T719 90-94 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T720 169-175 Disease denotes Anemia http://purl.obolibrary.org/obo/MONDO_0002280
T721 177-189 Disease denotes hypocalcemia http://purl.obolibrary.org/obo/MONDO_0018543
T722 191-205 Disease denotes hypomagnesemia http://purl.obolibrary.org/obo/MONDO_0018100
T723 280-288 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T724 280-284 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T725 309-317 Disease denotes Diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T726 365-373 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T727 365-369 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T728 394-402 Disease denotes Diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T729 459-467 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T730 459-463 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T731 506-514 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T732 516-534 Disease denotes avascular necrosis http://purl.obolibrary.org/obo/MONDO_0005380|http://purl.obolibrary.org/obo/MONDO_0018373
T734 536-548 Disease denotes osteoporosis http://purl.obolibrary.org/obo/MONDO_0005298
T735 579-587 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T736 579-583 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T737 622-635 Disease denotes Aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T738 801-814 Disease denotes Lung diseases http://purl.obolibrary.org/obo/MONDO_0005275
T739 848-856 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T740 848-852 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T741 868-876 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T742 868-872 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T743 960-968 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T744 960-964 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T745 1022-1031 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T746 1042-1050 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T747 1042-1046 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T748 1053-1061 Disease denotes Diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T749 1122-1133 Disease denotes Hepatitis-C http://purl.obolibrary.org/obo/MONDO_0005231
T750 1122-1131 Disease denotes Hepatitis http://purl.obolibrary.org/obo/MONDO_0002251
T751 1167-1175 Disease denotes Diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T752 1341-1349 Disease denotes Diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T753 1411-1419 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T754 1411-1415 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T755 1423-1430 Disease denotes Malaria http://purl.obolibrary.org/obo/MONDO_0005136
T756 1548-1556 Disease denotes Diarrhea http://purl.obolibrary.org/obo/MONDO_0001673

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T791 801-805 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T792 801-805 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T793 841-847 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T794 1308-1313 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T795 1388-1390 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T796 1543-1547 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T69397 110-120 Chemical denotes nucleoside http://purl.obolibrary.org/obo/CHEBI_33838
T20148 270-279 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T21128 298-308 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T81696 383-393 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T16278 719-733 Chemical denotes hydrocortisone http://purl.obolibrary.org/obo/CHEBI_17650
T64734 766-784 Chemical denotes methylprednisolone http://purl.obolibrary.org/obo/CHEBI_6888
T9447 930-939 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T79 940-949 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T53974 1109-1119 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T37213 1153-1156 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T38671 1214-1223 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T55075 1224-1233 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T122 130-168 http://purl.obolibrary.org/obo/GO_0045071 denotes inhibits the viral genomic replication
T123 143-168 http://purl.obolibrary.org/obo/GO_0019079 denotes viral genomic replication
T124 526-534 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T125 526-534 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T126 526-534 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T127 526-534 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T128 899-914 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T129 1153-1166 http://purl.obolibrary.org/obo/GO_0071897 denotes DNA synthesis
T130 1157-1166 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T131 1296-1304 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T132 1296-1304 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T133 1296-1304 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T134 1296-1304 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T448 0-6 Sentence denotes S. no.
T449 7-76 Sentence denotes Drug Effective against Mechanism of action Adverse effects References
T450 77-79 Sentence denotes 1.
T451 80-266 Sentence denotes Ribavirin SARS-CoV Anti-viral nucleoside analog – inhibits the viral genomic replication Anemia, hypocalcemia, hypomagnesemia, developed the risk of teratogenicity and bradycardia [118].
T452 267-269 Sentence denotes 2.
T453 270-351 Sentence denotes Lopinavir SARS-CoV Protease inhibitors Diarrhea, nausea, vomiting, headache [122]
T454 352-354 Sentence denotes 3.
T455 355-436 Sentence denotes Ritonavir SARS-CoV Protease inhibitors Diarrhea, nausea, vomiting, headache [122]
T456 437-439 Sentence denotes 4.
T457 440-559 Sentence denotes Methylprednisolone SARS-CoV Anti-inflammatory effect The onset of diabetes, avascular necrosis, osteoporosis. [132,133]
T458 560-562 Sentence denotes 5.
T459 563-670 Sentence denotes Corticosteroids SARS-CoV Inhibits pro-inflammatory effects Aspergillosis and fungal superinfection [49,134]
T460 671-673 Sentence denotes 6.
T461 674-824 Sentence denotes Methylprednisolone (0.5–1 mg/kg) followed by hydrocortisone (100 mg/8 h) and pulse doses of methylprednisolone (0.5 g for 3 d) Lung diseases – – [124]
T462 825-827 Sentence denotes 7.
T463 828-926 Sentence denotes Convalescent plasma SARS-CoV, MERS-CoV, SARS-CoV-2 Adaptive or passive immune response – [135,139]
T464 927-929 Sentence denotes 8.
T465 930-1095 Sentence denotes Lopinavir/ritonavir MERS-CoV, SARS-CoV-2 Not effective against MERS, anti-viral therapy for pneumonia caused by SARS-CoV-2 Diarrhea, nausea, vomiting, headache [140]
T466 1096-1098 Sentence denotes 9.
T467 1099-1209 Sentence denotes Pegylated interferon-α Hepatitis-C, MERS-CoV Inhibits DNA synthesis Diarrhea, nausea, vomiting, headache [140]
T468 1210-1213 Sentence denotes 10.
T469 1214-1387 Sentence denotes Lopinavir/ritonavir and IFN-β MERS-CoV Improves pulmonary, reduce viral load, and necrosis in lungs and extrapulmonary tissues Diarrhea, nausea, vomiting, headache [143,144]
T470 1388-1391 Sentence denotes 11.
T471 1392-1601 Sentence denotes Hydroxychloroquine SARS-CoV-2, Malaria Blocks maturation of endosome, maturation and its function by inhibiting the release of virions in the infected cell Diarrhea, nausea, vomiting, headache, dizziness [112]

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T280 169-175 Phenotype denotes Anemia http://purl.obolibrary.org/obo/HP_0001903
T281 177-189 Phenotype denotes hypocalcemia http://purl.obolibrary.org/obo/HP_0002901
T282 191-205 Phenotype denotes hypomagnesemia http://purl.obolibrary.org/obo/HP_0002917
T283 248-259 Phenotype denotes bradycardia http://purl.obolibrary.org/obo/HP_0001662
T284 309-317 Phenotype denotes Diarrhea http://purl.obolibrary.org/obo/HP_0002014
T285 319-335 Phenotype denotes nausea, vomiting http://purl.obolibrary.org/obo/HP_0002017
T286 337-345 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T287 394-402 Phenotype denotes Diarrhea http://purl.obolibrary.org/obo/HP_0002014
T288 404-420 Phenotype denotes nausea, vomiting http://purl.obolibrary.org/obo/HP_0002017
T289 422-430 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T290 516-534 Phenotype denotes avascular necrosis http://purl.obolibrary.org/obo/HP_0010885
T291 536-548 Phenotype denotes osteoporosis http://purl.obolibrary.org/obo/HP_0000939
T292 801-814 Phenotype denotes Lung diseases http://purl.obolibrary.org/obo/HP_0002088
T293 1022-1031 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T294 1053-1061 Phenotype denotes Diarrhea http://purl.obolibrary.org/obo/HP_0002014
T295 1063-1079 Phenotype denotes nausea, vomiting http://purl.obolibrary.org/obo/HP_0002017
T296 1081-1089 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T297 1122-1131 Phenotype denotes Hepatitis http://purl.obolibrary.org/obo/HP_0012115
T298 1167-1175 Phenotype denotes Diarrhea http://purl.obolibrary.org/obo/HP_0002014
T299 1177-1193 Phenotype denotes nausea, vomiting http://purl.obolibrary.org/obo/HP_0002017
T300 1195-1203 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T301 1341-1349 Phenotype denotes Diarrhea http://purl.obolibrary.org/obo/HP_0002014
T302 1351-1367 Phenotype denotes nausea, vomiting http://purl.obolibrary.org/obo/HP_0002017
T303 1369-1377 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T304 1548-1556 Phenotype denotes Diarrhea http://purl.obolibrary.org/obo/HP_0002014
T305 1558-1574 Phenotype denotes nausea, vomiting http://purl.obolibrary.org/obo/HP_0002017
T306 1576-1584 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T307 1586-1595 Phenotype denotes dizziness http://purl.obolibrary.org/obo/HP_0002321

2_test

Id Subject Object Predicate Lexical cue
32450165-32066541-66451116 432-435 32066541 denotes 122
32450165-15650220-66451117 551-554 15650220 denotes 132
32450165-15272286-66451118 663-665 15272286 denotes 49
32450165-14985565-66451119 918-921 14985565 denotes 135
32450165-14523782-66451120 922-925 14523782 denotes 139
32450165-16183666-66451121 1379-1382 16183666 denotes 143
32450165-15214887-66451122 1383-1386 15214887 denotes 144