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PMC:7243768 / 34415-36272 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1367 964-982 Gene denotes C-reactive protein Gene:1401
1368 1398-1424 Gene denotes aspartate aminotransferase Gene:26503
1369 240-248 Species denotes patients Tax:9606
1370 304-312 Species denotes patients Tax:9606
1371 332-340 Species denotes patients Tax:9606
1372 428-436 Species denotes patients Tax:9606
1373 501-509 Species denotes patients Tax:9606
1374 615-623 Species denotes patients Tax:9606
1375 818-826 Species denotes patients Tax:9606
1376 838-846 Species denotes patients Tax:9606
1377 1023-1031 Species denotes patients Tax:9606
1378 1150-1158 Species denotes patients Tax:9606
1379 1160-1168 Species denotes patients Tax:9606
1380 1327-1335 Species denotes patients Tax:9606
1381 1506-1514 Species denotes patients Tax:9606
1382 1673-1681 Species denotes patients Tax:9606
1383 372-380 Chemical denotes creatine MESH:D003401
1384 390-394 Chemical denotes urea MESH:D014508
1385 395-403 Chemical denotes nitrogen MESH:D009584
1386 1068-1076 Chemical denotes creatine MESH:D003401
1387 1108-1115 Chemical denotes lactose MESH:D007785
1388 1195-1203 Chemical denotes creatine MESH:D003401
1389 1531-1539 Chemical denotes creatine MESH:D003401
1390 88-96 Disease denotes COVID-19 MESH:C000657245
1391 253-275 Disease denotes chronic kidney disease MESH:D051436
1392 469-480 Disease denotes albuminuria MESH:D000419
1393 540-559 Disease denotes acute kidney injury MESH:D058186
1394 576-584 Disease denotes COVID-19 MESH:C000657245
1395 585-594 Disease denotes infection MESH:D007239
1396 737-745 Disease denotes COVID-19 MESH:C000657245
1397 746-755 Disease denotes infection MESH:D007239
1398 866-869 Disease denotes CKD MESH:D012080
1399 1452-1471 Disease denotes Acute kidney injury MESH:D058186
1400 1574-1583 Disease denotes mortality MESH:D003643
1401 1654-1669 Disease denotes kidney diseases MESH:D007674
1402 1694-1702 Disease denotes COVID-19 MESH:C000657245
1403 1741-1750 Disease denotes mortality MESH:D003643
1404 1785-1807 Disease denotes chronic kidney disease MESH:D051436
1405 1809-1828 Disease denotes acute kidney injury MESH:D058186
1406 1830-1841 Disease denotes proteinuria MESH:D011507
1407 1847-1856 Disease denotes hematuria MESH:D006417

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T296 186-192 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T297 261-267 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T298 384-389 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T299 546-552 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T300 887-898 Body_part denotes lymphocytic http://purl.org/sig/ont/fma/fma62863
T301 975-982 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T302 1061-1066 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T303 1102-1107 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T304 1189-1194 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T305 1261-1269 Body_part denotes platelet http://purl.org/sig/ont/fma/fma62851
T306 1274-1285 Body_part denotes lymphocytic http://purl.org/sig/ont/fma/fma62863
T307 1305-1315 Body_part denotes leukocytic http://purl.org/sig/ont/fma/fma62852
T308 1458-1464 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T309 1525-1530 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T310 1654-1660 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T311 1793-1799 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T312 1815-1821 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T150 186-192 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T151 261-267 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T152 384-389 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T153 546-552 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T154 1061-1066 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T155 1102-1107 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T156 1189-1194 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T157 1458-1464 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T158 1525-1530 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T159 1654-1660 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T160 1793-1799 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T161 1815-1821 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T392 88-96 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T393 253-275 Disease denotes chronic kidney disease http://purl.obolibrary.org/obo/MONDO_0005300
T394 261-275 Disease denotes kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T396 277-280 Disease denotes CDK http://purl.obolibrary.org/obo/MONDO_0005300
T397 540-559 Disease denotes acute kidney injury http://purl.obolibrary.org/obo/MONDO_0002492
T398 553-559 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T399 561-564 Disease denotes AKI http://purl.obolibrary.org/obo/MONDO_0002492
T400 576-584 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T401 585-594 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T402 737-745 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T403 746-755 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T404 866-869 Disease denotes CKD http://purl.obolibrary.org/obo/MONDO_0005300
T405 1452-1471 Disease denotes Acute kidney injury http://purl.obolibrary.org/obo/MONDO_0002492
T406 1465-1471 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T407 1548-1551 Disease denotes AKI http://purl.obolibrary.org/obo/MONDO_0002492
T408 1654-1669 Disease denotes kidney diseases http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T410 1694-1702 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T411 1785-1807 Disease denotes chronic kidney disease http://purl.obolibrary.org/obo/MONDO_0005300
T412 1793-1807 Disease denotes kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T414 1809-1828 Disease denotes acute kidney injury http://purl.obolibrary.org/obo/MONDO_0002492
T415 1822-1828 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T416 1830-1841 Disease denotes proteinuria http://purl.obolibrary.org/obo/MONDO_0003634

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T470 84-87 http://purl.obolibrary.org/obo/CLO_0001046 denotes 116
T471 186-192 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T472 186-192 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T473 186-192 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T474 261-267 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T475 261-267 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T476 261-267 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T477 351-352 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T478 384-389 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T479 384-389 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T480 447-448 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T481 546-552 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T482 546-552 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T483 546-552 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T484 1224-1228 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T485 1224-1228 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T486 1458-1464 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T487 1458-1464 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T488 1458-1464 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T489 1654-1660 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T490 1654-1660 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T491 1654-1660 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T492 1793-1799 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T493 1793-1799 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T494 1793-1799 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T495 1815-1821 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T496 1815-1821 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T497 1815-1821 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T177 372-380 Chemical denotes creatine http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947
T179 390-394 Chemical denotes urea http://purl.obolibrary.org/obo/CHEBI_16199
T180 395-403 Chemical denotes nitrogen http://purl.obolibrary.org/obo/CHEBI_25555
T181 975-982 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T182 1068-1076 Chemical denotes creatine http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947
T184 1108-1115 Chemical denotes lactose http://purl.obolibrary.org/obo/CHEBI_17716
T185 1195-1203 Chemical denotes creatine http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947
T187 1224-1228 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T188 1398-1407 Chemical denotes aspartate http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314
T191 1429-1436 Chemical denotes lactate http://purl.obolibrary.org/obo/CHEBI_24996
T192 1531-1539 Chemical denotes creatine http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T231 0-282 Sentence denotes According to an article published by Wang L and his colleagues reported that out of 116 COVID-19 positive cases from Renmin Hospital of Wuhan University, out of whom 111 didn't have any kidney issues in their history and the remaining five patients had chronic kidney disease (CDK).
T232 283-488 Sentence denotes Also, out of the 111 patients, only 10.8% of the patients exhibited a slight increase in creatine or blood urea nitrogen levels, and 7.2% of the patients had shown a minute raise in the albuminuria levels.
T233 489-595 Sentence denotes None of the patients out of 111 didn't exhibit any acute kidney injury (AKI) after the COVID-19 infection.
T234 596-806 Sentence denotes The remaining five patients who were already undergoing continuous renal replacement therapy (CRRT) also didn't show any fatal effects after COVID-19 infection confirmed by diagnosing the renal indicators [99].
T235 807-946 Sentence denotes Out of 701 patients, 2% of the patients were found to have CKD, and the average lymphocytic number was found to be reduced than the normal.
T236 947-1019 Sentence denotes High sensitivity C-reactive protein levels were significantly increased.
T237 1020-1130 Sentence denotes In patients reported with high levels of serum, creatine indicated high levels of serum lactose dehydrogenase.
T238 1131-1233 Sentence denotes Among hospitalized patients, patients with high levels of serum creatine were mostly old and male sex.
T239 1234-1322 Sentence denotes Also, they exhibited lower platelet and lymphocytic count and elevated leukocytic count.
T240 1323-1451 Sentence denotes The patients with elevated procalcitonin also exhibited elevated levels of aspartate aminotransferase and lactate dehydrogenase.
T241 1452-1547 Sentence denotes Acute kidney injury was significantly higher in those patients with high serum creatine levels.
T242 1548-1615 Sentence denotes AKI eventually results in mortality [100] (represented in Table 1).
T243 1616-1857 Sentence denotes Therefore, advanced identification of kidney diseases in patients affected by COVID-19 may help the clinicians to reduce the mortality rate due to comorbidities such as chronic kidney disease, acute kidney injury, proteinuria, and hematuria.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T172 253-275 Phenotype denotes chronic kidney disease http://purl.obolibrary.org/obo/HP_0012622
T173 469-480 Phenotype denotes albuminuria http://purl.obolibrary.org/obo/HP_0012592
T174 540-559 Phenotype denotes acute kidney injury http://purl.obolibrary.org/obo/HP_0001919
T175 561-564 Phenotype denotes AKI http://purl.obolibrary.org/obo/HP_0001919
T176 1452-1471 Phenotype denotes Acute kidney injury http://purl.obolibrary.org/obo/HP_0001919
T177 1548-1551 Phenotype denotes AKI http://purl.obolibrary.org/obo/HP_0001919
T178 1654-1669 Phenotype denotes kidney diseases http://purl.obolibrary.org/obo/HP_0000112
T179 1785-1807 Phenotype denotes chronic kidney disease http://purl.obolibrary.org/obo/HP_0012622
T180 1809-1828 Phenotype denotes acute kidney injury http://purl.obolibrary.org/obo/HP_0001919
T181 1830-1841 Phenotype denotes proteinuria http://purl.obolibrary.org/obo/HP_0000093
T182 1847-1856 Phenotype denotes hematuria http://purl.obolibrary.org/obo/HP_0000790

2_test

Id Subject Object Predicate Lexical cue
32450165-32247631-66451083 1585-1588 32247631 denotes 100