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PMC:7243768 / 2293-3408 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
105 913-916 Gene denotes Nsp Gene:92521
106 393-397 Species denotes CoVs Tax:11118
107 540-550 Species denotes SARS-CoV-2 Tax:2697049

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T11 35-43 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T12 114-126 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T13 259-265 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T14 267-270 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T15 370-376 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T16 386-389 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T17 434-437 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T18 530-534 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T19 645-653 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T20 682-685 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T21 686-692 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T22 798-802 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T23 810-817 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T24 834-872 Body_part denotes membranes of the endoplasmic reticulum http://purl.org/sig/ont/fma/fma80351
T25 851-872 Body_part denotes endoplasmic reticulum http://purl.org/sig/ont/fma/fma63842
T26 884-891 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T27 905-911 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T28 917-925 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T29 935-938 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T30 993-1027 Body_part denotes lumen of the endoplasmic reticulum http://purl.org/sig/ont/fma/fma84806
T31 1006-1027 Body_part denotes endoplasmic reticulum http://purl.org/sig/ont/fma/fma63842
T32 1091-1110 Body_part denotes extracellular space http://purl.org/sig/ont/fma/fma70022

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T10 496-500 Body_part denotes tail http://purl.obolibrary.org/obo/UBERON_0002415

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T39 540-548 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T40 540-544 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T29 5-10 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T30 61-66 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T31 159-160 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T32 161-169 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T33 175-176 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 320-328 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T35 337-338 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T36 401-402 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 461-463 http://purl.obolibrary.org/obo/CLO_0007074 denotes kb
T38 461-463 http://purl.obolibrary.org/obo/CLO_0051988 denotes kb
T39 494-495 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T40 496-500 http://purl.obolibrary.org/obo/UBERON_0002415 denotes tail
T41 530-534 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T42 622-626 http://purl.obolibrary.org/obo/CLO_0007653 denotes M, E
T43 711-712 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T44 732-733 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T45 798-802 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T46 834-843 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T47 956-957 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T4 35-43 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T5 114-126 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T6 645-653 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T7 810-817 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T8 884-891 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T9 917-925 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 1066-1076 http://purl.obolibrary.org/obo/GO_0006887 denotes exocytosis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T19 0-81 Sentence denotes This virus possesses four distinct proteins that provide the virus its structure.
T20 82-219 Sentence denotes The outermost layer consists of glycoprotein spikes followed by an envelope, a membrane, and a nucleocapsid layer towards the inner side.
T21 220-271 Sentence denotes The nucleocapsid layer holds the viral genome, RNA.
T22 272-381 Sentence denotes The nucleocapsid layer, envelope, and the spike membrane provide a protective layer for the viral genome [5].
T23 382-505 Sentence denotes The RNA of CoVs is a single-stranded positive-sense RNA (+ssRNA), which is ~30 kb possessing 5′-cap and 3′-poly-A tail [6].
T24 506-654 Sentence denotes After entering the host cell, the SARS-CoV-2 undergoes replication by using the host's machinery and synthesizes N, M, E, and S structural proteins.
T25 655-743 Sentence denotes The negative strand of the RNA genome is produced using a positive-strand as a template.
T26 744-912 Sentence denotes At the time of the process of replication in the host cell, the M protein attaches to the membranes of the endoplasmic reticulum, and the N protein binds to the genome.
T27 913-1028 Sentence denotes Nsp proteins help the RNA to assemble into a helical structure which enters the lumen of the endoplasmic reticulum.
T28 1029-1115 Sentence denotes The viral progenies produced undergo exocytosis and enter the extracellular space [7].

2_test

Id Subject Object Predicate Lexical cue
32450165-31967327-66451000 502-503 31967327 denotes 6