PMC:7242012 / 5910-6551
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 172 | 336-346 | Species | denotes | SARS‐CoV‐2 | Tax:2697049 |
| 173 | 71-79 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 174 | 251-259 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 175 | 622-630 | Disease | denotes | COVID‐19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T22 | 157-165 | Body_part | denotes | alveolar | http://purl.org/sig/ont/fma/fma264783 |
| T23 | 202-208 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
| T24 | 347-350 | Body_part | denotes | IgM | http://purl.org/sig/ont/fma/fma62873 |
| T25 | 355-358 | Body_part | denotes | IgG | http://purl.org/sig/ont/fma/fma62872 |
| T26 | 607-611 | Body_part | denotes | sole | http://purl.org/sig/ont/fma/fma25000 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T6 | 202-208 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T58 | 71-79 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T59 | 251-259 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T60 | 336-340 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T61 | 622-630 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T53 | 91-95 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T54 | 97-103 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 2 , 7 |
| T55 | 139-146 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T56 | 291-298 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T57 | 300-306 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 2 , 7 |
| T58 | 320-325 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T59 | 405-409 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T60 | 541-546 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 7-28 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | reverse transcription |
| T9 | 15-28 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T79 | 0-96 | Sentence | denotes | Today, reverse transcription polymerase chain reaction (RT‐PCR) is the COVID‐19 diagnostic test. |
| T80 | 97-246 | Sentence | denotes | 2 , 7 RT‐PCR sensitivity is highest for testing bronchial alveolar lavage fluid (93%) and declines for sputum (72%) and nasal swab (63%) specimens. |
| T81 | 247-299 | Sentence | denotes | 10 COVID‐19 diagnosis might require repeat testing. |
| T82 | 300-384 | Sentence | denotes | 2 , 7 Serological tests to detect SARS‐CoV‐2 IgM and IgG antibodies are available. |
| T83 | 385-641 | Sentence | denotes | However, because of test sensitivity and other quality concerns, the US Food and Drug Administration (FDA; https://www.fda.gov) advises current serological tests are best used for surveillance and research, and not as the sole basis for COVID‐19 diagnosis. |