PMC:7234792 / 731-1607
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 25 | 278-285 | Species | denotes | patient | Tax:9606 |
| 26 | 442-455 | Chemical | denotes | emtricitabine | MESH:D000068679 |
| 27 | 460-481 | Chemical | denotes | tenofovir alafenamide | MESH:C442442 |
| 28 | 585-614 | Chemical | denotes | tenofovir disoproxil fumarate | MESH:D000068698 |
| 29 | 619-632 | Chemical | denotes | emtricitabine | MESH:D000068679 |
| 30 | 692-703 | Chemical | denotes | oseltamivir | MESH:D053139 |
| 31 | 98-103 | Disease | denotes | fever | MESH:D005334 |
| 32 | 105-110 | Disease | denotes | cough | MESH:D003371 |
| 33 | 116-124 | Disease | denotes | dyspnoea | MESH:D004417 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T2 | 486-489 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T9 | 132-141 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T10 | 522-524 | Disease | denotes | he | http://purl.obolibrary.org/obo/MONDO_0017319 |
| T11 | 677-686 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T12 | 788-797 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10 | 60-62 | http://purl.obolibrary.org/obo/CLO_0009877 | denotes | NY |
| T11 | 70-71 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T12 | 72-74 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 34 |
| T13 | 142-143 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T14 | 161-163 | http://purl.obolibrary.org/obo/CLO_0008192 | denotes | NP |
| T15 | 185-186 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T16 | 377-378 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T17 | 546-547 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T18 | 638-639 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T19 | 836-838 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T13 | 60-62 | Chemical | denotes | NY | http://purl.obolibrary.org/obo/CHEBI_73427 |
| T14 | 161-163 | Chemical | denotes | NP | http://purl.obolibrary.org/obo/CHEBI_50803|http://purl.obolibrary.org/obo/CHEBI_53793|http://purl.obolibrary.org/obo/CHEBI_73425 |
| T17 | 442-455 | Chemical | denotes | emtricitabine | http://purl.obolibrary.org/obo/CHEBI_31536 |
| T18 | 460-481 | Chemical | denotes | tenofovir alafenamide | http://purl.obolibrary.org/obo/CHEBI_90926 |
| T19 | 460-469 | Chemical | denotes | tenofovir | http://purl.obolibrary.org/obo/CHEBI_134504|http://purl.obolibrary.org/obo/CHEBI_63625|http://purl.obolibrary.org/obo/CHEBI_63716 |
| T22 | 585-614 | Chemical | denotes | tenofovir disoproxil fumarate | http://purl.obolibrary.org/obo/CHEBI_63718 |
| T23 | 585-605 | Chemical | denotes | tenofovir disoproxil | http://purl.obolibrary.org/obo/CHEBI_63717 |
| T24 | 585-594 | Chemical | denotes | tenofovir | http://purl.obolibrary.org/obo/CHEBI_134504|http://purl.obolibrary.org/obo/CHEBI_63625|http://purl.obolibrary.org/obo/CHEBI_63716 |
| T27 | 606-614 | Chemical | denotes | fumarate | http://purl.obolibrary.org/obo/CHEBI_29806 |
| T28 | 619-632 | Chemical | denotes | emtricitabine | http://purl.obolibrary.org/obo/CHEBI_31536 |
| T29 | 692-703 | Chemical | denotes | oseltamivir | http://purl.obolibrary.org/obo/CHEBI_7798 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 98-103 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T2 | 105-110 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T3 | 116-124 | Phenotype | denotes | dyspnoea | http://purl.obolibrary.org/obo/HP_0002094 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 0-249 | Sentence | denotes | 14 days before admission to Mount Sinai Hospital (New York, NY, USA), a 34-year-old man developed fever, cough, and dyspnoea due to influenza A, confirmed by an NP swab 2 days later at a walk-in urgent care facility of the Mount Sinai Health System. |
| T4 | 250-273 | Sentence | denotes | No radiograph was done. |
| T5 | 274-417 | Sentence | denotes | The patient was previously healthy with no past hospitalisations, and works as an anaesthesiologist in a large medical centre in New York City. |
| T6 | 418-657 | Sentence | denotes | His only medication was emtricitabine and tenofovir alafenamide for HIV pre-exposure prophylaxis, which he had been taking once a day for 5 months (and prior to that, tenofovir disoproxil fumarate and emtricitabine once a day for 3 years). |
| T7 | 658-758 | Sentence | denotes | He was treated for influenza with oseltamivir for 5 days; symptoms resolved after 5 days of illness. |
| T8 | 759-876 | Sentence | denotes | He felt fully recovered from influenza, and returned to work in the hospital 11 days after his symptoms had resolved. |