PMC:7234792 / 3088-3797 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"35","span":{"begin":272,"end":310},"obj":"Disease"}],"attributes":[{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"MESH:D003318"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Imaging with chest radiograph, chest CT, and radial EBUS\n(A) Admission chest radiograph (hospital day 1) with right mid-lung nodule (arrow). (B) First chest CT (day 2) with right lower lobe rounded opacity with possible halo sign (arrow). A second chest CT (day 6) showed new right upper lobe nodular opacities (C; arrows), a new large ground glass opacity in the right lower lobe (D; arrow); and enlargement of the right lower lobe rounded opacity with possible reverse halo sign (E; green arrow) and a new left lower lobe rounded opacity (E; blue arrow). (F) Radial EBUS image of right lower lobe rounded opacity (arrow) used to target the transbronchial lung biopsy on day 9. EBUS=endobronchial ultrasound."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T15","span":{"begin":13,"end":18},"obj":"Body_part"},{"id":"T16","span":{"begin":31,"end":36},"obj":"Body_part"},{"id":"T17","span":{"begin":71,"end":76},"obj":"Body_part"},{"id":"T18","span":{"begin":120,"end":124},"obj":"Body_part"},{"id":"T19","span":{"begin":151,"end":156},"obj":"Body_part"},{"id":"T20","span":{"begin":173,"end":189},"obj":"Body_part"},{"id":"T21","span":{"begin":248,"end":253},"obj":"Body_part"},{"id":"T22","span":{"begin":276,"end":292},"obj":"Body_part"},{"id":"T23","span":{"begin":364,"end":380},"obj":"Body_part"},{"id":"T24","span":{"begin":416,"end":432},"obj":"Body_part"},{"id":"T25","span":{"begin":508,"end":523},"obj":"Body_part"},{"id":"T26","span":{"begin":582,"end":598},"obj":"Body_part"},{"id":"T27","span":{"begin":657,"end":661},"obj":"Body_part"}],"attributes":[{"id":"A15","pred":"fma_id","subj":"T15","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A16","pred":"fma_id","subj":"T16","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A17","pred":"fma_id","subj":"T17","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A18","pred":"fma_id","subj":"T18","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma7337"},{"id":"A21","pred":"fma_id","subj":"T21","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma7333"},{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma7337"},{"id":"A24","pred":"fma_id","subj":"T24","obj":"http://purl.org/sig/ont/fma/fma7337"},{"id":"A25","pred":"fma_id","subj":"T25","obj":"http://purl.org/sig/ont/fma/fma7371"},{"id":"A26","pred":"fma_id","subj":"T26","obj":"http://purl.org/sig/ont/fma/fma7337"},{"id":"A27","pred":"fma_id","subj":"T27","obj":"http://purl.org/sig/ont/fma/fma7195"}],"text":"Imaging with chest radiograph, chest CT, and radial EBUS\n(A) Admission chest radiograph (hospital day 1) with right mid-lung nodule (arrow). (B) First chest CT (day 2) with right lower lobe rounded opacity with possible halo sign (arrow). A second chest CT (day 6) showed new right upper lobe nodular opacities (C; arrows), a new large ground glass opacity in the right lower lobe (D; arrow); and enlargement of the right lower lobe rounded opacity with possible reverse halo sign (E; green arrow) and a new left lower lobe rounded opacity (E; blue arrow). (F) Radial EBUS image of right lower lobe rounded opacity (arrow) used to target the transbronchial lung biopsy on day 9. EBUS=endobronchial ultrasound."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T8","span":{"begin":13,"end":18},"obj":"Body_part"},{"id":"T9","span":{"begin":31,"end":36},"obj":"Body_part"},{"id":"T10","span":{"begin":71,"end":76},"obj":"Body_part"},{"id":"T11","span":{"begin":120,"end":124},"obj":"Body_part"},{"id":"T12","span":{"begin":151,"end":156},"obj":"Body_part"},{"id":"T13","span":{"begin":185,"end":189},"obj":"Body_part"},{"id":"T14","span":{"begin":248,"end":253},"obj":"Body_part"},{"id":"T15","span":{"begin":288,"end":292},"obj":"Body_part"},{"id":"T16","span":{"begin":376,"end":380},"obj":"Body_part"},{"id":"T17","span":{"begin":428,"end":432},"obj":"Body_part"},{"id":"T18","span":{"begin":519,"end":523},"obj":"Body_part"},{"id":"T19","span":{"begin":594,"end":598},"obj":"Body_part"},{"id":"T20","span":{"begin":657,"end":661},"obj":"Body_part"}],"attributes":[{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A9","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A12","pred":"uberon_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A13","pred":"uberon_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A14","pred":"uberon_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A15","pred":"uberon_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A16","pred":"uberon_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A17","pred":"uberon_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A18","pred":"uberon_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A19","pred":"uberon_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A20","pred":"uberon_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"}],"text":"Imaging with chest radiograph, chest CT, and radial EBUS\n(A) Admission chest radiograph (hospital day 1) with right mid-lung nodule (arrow). (B) First chest CT (day 2) with right lower lobe rounded opacity with possible halo sign (arrow). A second chest CT (day 6) showed new right upper lobe nodular opacities (C; arrows), a new large ground glass opacity in the right lower lobe (D; arrow); and enlargement of the right lower lobe rounded opacity with possible reverse halo sign (E; green arrow) and a new left lower lobe rounded opacity (E; blue arrow). (F) Radial EBUS image of right lower lobe rounded opacity (arrow) used to target the transbronchial lung biopsy on day 9. EBUS=endobronchial ultrasound."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T47","span":{"begin":13,"end":18},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T48","span":{"begin":31,"end":36},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T49","span":{"begin":58,"end":59},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T50","span":{"begin":71,"end":76},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T51","span":{"begin":120,"end":124},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T52","span":{"begin":120,"end":124},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T53","span":{"begin":142,"end":143},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T54","span":{"begin":151,"end":156},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T55","span":{"begin":239,"end":240},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T56","span":{"begin":248,"end":253},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T57","span":{"begin":324,"end":325},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T58","span":{"begin":502,"end":503},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T59","span":{"begin":657,"end":661},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T60","span":{"begin":657,"end":661},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"}],"text":"Imaging with chest radiograph, chest CT, and radial EBUS\n(A) Admission chest radiograph (hospital day 1) with right mid-lung nodule (arrow). (B) First chest CT (day 2) with right lower lobe rounded opacity with possible halo sign (arrow). A second chest CT (day 6) showed new right upper lobe nodular opacities (C; arrows), a new large ground glass opacity in the right lower lobe (D; arrow); and enlargement of the right lower lobe rounded opacity with possible reverse halo sign (E; green arrow) and a new left lower lobe rounded opacity (E; blue arrow). (F) Radial EBUS image of right lower lobe rounded opacity (arrow) used to target the transbronchial lung biopsy on day 9. EBUS=endobronchial ultrasound."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T9","span":{"begin":463,"end":480},"obj":"Phenotype"}],"attributes":[{"id":"A9","pred":"hp_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/HP_0032983"}],"text":"Imaging with chest radiograph, chest CT, and radial EBUS\n(A) Admission chest radiograph (hospital day 1) with right mid-lung nodule (arrow). (B) First chest CT (day 2) with right lower lobe rounded opacity with possible halo sign (arrow). A second chest CT (day 6) showed new right upper lobe nodular opacities (C; arrows), a new large ground glass opacity in the right lower lobe (D; arrow); and enlargement of the right lower lobe rounded opacity with possible reverse halo sign (E; green arrow) and a new left lower lobe rounded opacity (E; blue arrow). (F) Radial EBUS image of right lower lobe rounded opacity (arrow) used to target the transbronchial lung biopsy on day 9. EBUS=endobronchial ultrasound."}

{"project":"LitCovid-sentences","denotations":[{"id":"T22","span":{"begin":57,"end":238},"obj":"Sentence"},{"id":"T23","span":{"begin":239,"end":678},"obj":"Sentence"},{"id":"T24","span":{"begin":679,"end":709},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Imaging with chest radiograph, chest CT, and radial EBUS\n(A) Admission chest radiograph (hospital day 1) with right mid-lung nodule (arrow). (B) First chest CT (day 2) with right lower lobe rounded opacity with possible halo sign (arrow). A second chest CT (day 6) showed new right upper lobe nodular opacities (C; arrows), a new large ground glass opacity in the right lower lobe (D; arrow); and enlargement of the right lower lobe rounded opacity with possible reverse halo sign (E; green arrow) and a new left lower lobe rounded opacity (E; blue arrow). (F) Radial EBUS image of right lower lobe rounded opacity (arrow) used to target the transbronchial lung biopsy on day 9. EBUS=endobronchial ultrasound."}