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PMC:7234792 / 3088-3797 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
35 272-310 Disease denotes new right upper lobe nodular opacities MESH:D003318

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T15 13-18 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T16 31-36 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T17 71-76 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T18 120-124 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T19 151-156 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T20 173-189 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T21 248-253 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T22 276-292 Body_part denotes right upper lobe http://purl.org/sig/ont/fma/fma7333
T23 364-380 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T24 416-432 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T25 508-523 Body_part denotes left lower lobe http://purl.org/sig/ont/fma/fma7371
T26 582-598 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T27 657-661 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T8 13-18 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T9 31-36 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T10 71-76 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T11 120-124 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T12 151-156 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T13 185-189 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T14 248-253 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T15 288-292 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T16 376-380 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T17 428-432 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T18 519-523 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T19 594-598 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T20 657-661 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T47 13-18 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T48 31-36 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T49 58-59 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T50 71-76 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T51 120-124 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T52 120-124 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T53 142-143 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T54 151-156 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T55 239-240 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T56 248-253 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T57 324-325 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58 502-503 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T59 657-661 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T60 657-661 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T9 463-480 Phenotype denotes reverse halo sign http://purl.obolibrary.org/obo/HP_0032983

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T22 57-238 Sentence denotes (A) Admission chest radiograph (hospital day 1) with right mid-lung nodule (arrow). (B) First chest CT (day 2) with right lower lobe rounded opacity with possible halo sign (arrow).
T23 239-678 Sentence denotes A second chest CT (day 6) showed new right upper lobe nodular opacities (C; arrows), a new large ground glass opacity in the right lower lobe (D; arrow); and enlargement of the right lower lobe rounded opacity with possible reverse halo sign (E; green arrow) and a new left lower lobe rounded opacity (E; blue arrow). (F) Radial EBUS image of right lower lobe rounded opacity (arrow) used to target the transbronchial lung biopsy on day 9.
T24 679-709 Sentence denotes EBUS=endobronchial ultrasound.