PMC:7234792 / 10548-11015
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 211 | 60-69 | Disease | denotes | pneumonia | MESH:D011014 |
| 212 | 219-228 | Disease | denotes | infection | MESH:D007239 |
| 213 | 277-283 | Disease | denotes | sepsis | MESH:D018805 |
| 214 | 359-370 | Disease | denotes | lung injury | MESH:D055370 |
| 215 | 457-466 | Disease | denotes | pneumonia | MESH:D011014 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T78 | 359-363 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T47 | 359-363 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T65 | 60-69 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T66 | 201-228 | Disease | denotes | hospital-acquired infection | http://purl.obolibrary.org/obo/MONDO_0043544 |
| T67 | 219-228 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T68 | 353-370 | Disease | denotes | acute lung injury | http://purl.obolibrary.org/obo/MONDO_0006502|http://purl.obolibrary.org/obo/MONDO_0015796 |
| T70 | 364-370 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T71 | 457-466 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T139 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T140 | 49-59 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | organising |
| T141 | 199-200 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T142 | 359-363 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T143 | 359-363 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T144 | 384-394 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | organising |
| T145 | 446-456 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | organising |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T37 | 60-69 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T38 | 277-283 | Phenotype | denotes | sepsis | http://purl.obolibrary.org/obo/HP_0100806 |
| T39 | 353-370 | Phenotype | denotes | acute lung injury | http://www.orpha.net/ORDO/Orphanet_178320 |
| T40 | 457-466 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T67 | 0-263 | Sentence | denotes | A third possible explanation is that cryptogenic organising pneumonia or similar inflammatory illness spontaneously worsened and improved over the hospitalisation, and the positive RT-PCR represents a hospital-acquired infection incidental to the hospital course. |
| T68 | 264-467 | Sentence | denotes | However, the sepsis-like presentation and the pathology and cytology findings showing an acute lung injury pattern with organising fibrin do not support the diagnosis of cryptogenic organising pneumonia. |