PMC:7219429 / 1140-1481
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T5 | 5-20 | Body_part | denotes | plasma membrane | http://purl.org/sig/ont/fma/fma63841 |
| T6 | 29-34 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T7 | 97-102 | Body_part | denotes | sugar | http://purl.org/sig/ont/fma/fma82737 |
| T8 | 120-125 | Body_part | denotes | lipid | http://purl.org/sig/ont/fma/fma67264 |
| T9 | 131-142 | Body_part | denotes | ganglioside | http://purl.org/sig/ont/fma/fma82816 |
| T10 | 249-260 | Body_part | denotes | ganglioside | http://purl.org/sig/ont/fma/fma82816 |
| T11 | 296-303 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T10 | 279-287 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 5-11 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
| T12 | 12-20 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T13 | 29-34 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T14 | 118-119 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T15 | 153-154 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T16 | 196-203 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T15 | 85-88 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
| T16 | 113-116 | Chemical | denotes | GM1 | http://purl.obolibrary.org/obo/CHEBI_18216|http://purl.obolibrary.org/obo/CHEBI_61048|http://purl.obolibrary.org/obo/CHEBI_73110 |
| T19 | 120-125 | Chemical | denotes | lipid | http://purl.obolibrary.org/obo/CHEBI_18059 |
| T20 | 131-142 | Chemical | denotes | ganglioside | http://purl.obolibrary.org/obo/CHEBI_28892 |
| T21 | 171-179 | Chemical | denotes | cofactor | http://purl.obolibrary.org/obo/CHEBI_23357 |
| T22 | 226-229 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
| T23 | 249-260 | Chemical | denotes | ganglioside | http://purl.obolibrary.org/obo/CHEBI_28892 |
| T24 | 296-303 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T25 | 333-336 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T1 | 113-116 | GlycoEpitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14 | 36-204 | Sentence | denotes | Unexpected molecular similarity is shown between ATM and the sugar moiety of GM1, a lipid raft ganglioside acting as a host attachment cofactor for respiratory viruses. |
| T15 | 205-304 | Sentence | denotes | Due to this mimicry, ATM interacts with the ganglioside-binding domain of SARS-CoV-2 spike protein. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 61 | 290-295 | Gene | denotes | spike | Gene:43740568 |
| 66 | 279-289 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 74 | 97-102 | Chemical | denotes | sugar | MESH:D000073893 |
| 75 | 113-116 | Chemical | denotes | GM1 | MESH:D005677 |
| 76 | 120-125 | Chemical | denotes | lipid | MESH:D008055 |
| 77 | 131-142 | Chemical | denotes | ganglioside | MESH:D005732 |
| 78 | 249-260 | Chemical | denotes | ganglioside | MESH:D005732 |